RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
MRPL49-201ENST00000279242 GAGE2DQ9UEU5 116 aa11.48□□□□□ -0.57
MRPL49-201ENST00000279242 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
MRPL49-201ENST00000279242 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
MRPL49-201ENST00000279242 IGHV3OR16-12A0A075B7B8 117 aa11.47□□□□□ -0.57
MRPL49-201ENST00000279242 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
MRPL49-201ENST00000279242 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
MRPL49-201ENST00000279242 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
MRPL49-201ENST00000279242 TRAV26-1A0A087WT03 109 aa11.47□□□□□ -0.57
MRPL49-201ENST00000279242 HERV-K104P63124 156 aa11.47□□□□□ -0.57
MRPL49-201ENST00000279242 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
MRPL49-201ENST00000279242 LRRC75A-AS1Q8N1F1 130 aa11.47□□□□□ -0.57
MRPL49-201ENST00000279242 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
MRPL49-201ENST00000279242 A8MZ25 164 aa11.46□□□□□ -0.57
MRPL49-201ENST00000279242 PRM2P04554 102 aa11.46□□□□□ -0.57
MRPL49-201ENST00000279242 LINC00308Q8TCZ7 52 aa11.46□□□□□ -0.57
MRPL49-201ENST00000279242 VPS13CQ709C8 3753 aa11.45□□□□□ -0.58
MRPL49-201ENST00000279242 STHQ8IWL8 128 aa11.45□□□□□ -0.58
MRPL49-201ENST00000279242 CREBBPQ92793 2442 aa11.44□□□□□ -0.58
MRPL49-201ENST00000279242 K7EQD1 137 aa11.44□□□□□ -0.58
MRPL49-201ENST00000279242 CMC4P56277 68 aaPredicted RBP11.44□□□□□ -0.58
MRPL49-201ENST00000279242 Q9H8V8 135 aa11.44□□□□□ -0.58
MRPL49-201ENST00000279242 TRAV4A0A0B4J268 109 aa11.43□□□□□ -0.58
MRPL49-201ENST00000279242 MAPK1IP1LQ8NDC0 245 aa11.43□□□□□ -0.58
MRPL49-201ENST00000279242 CITED2Q99967 270 aaPredicted RBP11.43□□□□□ -0.58
MRPL49-201ENST00000279242 SMIM1B2RUZ4 78 aa11.43□□□□□ -0.58
MRPL49-201ENST00000279242 COX6A2Q02221 97 aa11.43□□□□□ -0.58
MRPL49-201ENST00000279242 ODF3L2Q3SX64 289 aa11.43□□□□□ -0.58
MRPL49-201ENST00000279242 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
MRPL49-201ENST00000279242 FAM208BQ5VWN6 2430 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 COX7A2LO14548 114 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 ACYP1P07311 99 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 NPC2P61916 151 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 CLEC2BQ92478 149 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 TRGV1A0A0A0MS02 117 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 KHDC1LQ5JSQ8 128 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 SHISA2Q6UWI4 295 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
MRPL49-201ENST00000279242 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
MRPL49-201ENST00000279242 CR1P17927 2039 aa11.41□□□□□ -0.58
MRPL49-201ENST00000279242 TTC32Q5I0X7 151 aa11.41□□□□□ -0.58
MRPL49-201ENST00000279242 CDC42SE2Q9NRR3 84 aa11.41□□□□□ -0.58
MRPL49-201ENST00000279242 PF4P02776 101 aa11.4□□□□□ -0.58
MRPL49-201ENST00000279242 NDUFV3P56181 108 aaKnown RBP11.4□□□□□ -0.58
MRPL49-201ENST00000279242 GAGE5Q13069 117 aa11.4□□□□□ -0.58
MRPL49-201ENST00000279242 GAGE6Q13070 117 aa11.4□□□□□ -0.58
MRPL49-201ENST00000279242 C15orf53Q8NAA6 179 aa11.4□□□□□ -0.58
MRPL49-201ENST00000279242 DEFB113Q30KQ7 82 aa11.4□□□□□ -0.59
MRPL49-201ENST00000279242 ZNF462Q96JM2 2506 aa11.39□□□□□ -0.59
MRPL49-201ENST00000279242 TRACP01848 142 aa11.39□□□□□ -0.59
MRPL49-201ENST00000279242 Q6ZSV7 163 aa11.39□□□□□ -0.59
MRPL49-201ENST00000279242 F5H768 121 aa11.38□□□□□ -0.59
MRPL49-201ENST00000279242 PRIMA1Q86XR5 153 aa11.38□□□□□ -0.59
MRPL49-201ENST00000279242 DAND5Q8N907 189 aa11.38□□□□□ -0.59
MRPL49-201ENST00000279242 ANKRD17O75179 2603 aaKnown RBP11.38□□□□□ -0.59
MRPL49-201ENST00000279242 USP9XQ93008 2570 aaPredicted RBP11.38□□□□□ -0.59
MRPL49-201ENST00000279242 CRLF1O75462 422 aa11.38□□□□□ -0.59
MRPL49-201ENST00000279242 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
MRPL49-201ENST00000279242 NTM-AS1Q6ZSK4 140 aa11.38□□□□□ -0.59
MRPL49-201ENST00000279242 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 FAM222AQ5U5X8 452 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 FAM110AQ9BQ89 295 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 TMEM243Q9BU79 118 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 COL12A1Q99715 3063 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 UBE2L6O14933 153 aa11.36□□□□□ -0.59
MRPL49-201ENST00000279242 NHLRC4P0CG21 123 aaPredicted RBP11.36□□□□□ -0.59
MRPL49-201ENST00000279242 ZNF843Q8N446 348 aa11.35□□□□□ -0.59
MRPL49-201ENST00000279242 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
MRPL49-201ENST00000279242 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
MRPL49-201ENST00000279242 Q6ZTI0 123 aa11.35□□□□□ -0.59
MRPL49-201ENST00000279242 C16orf74Q96GX8 76 aa11.35□□□□□ -0.59
MRPL49-201ENST00000279242 IMUPQ9GZP8 106 aa11.35□□□□□ -0.59
MRPL49-201ENST00000279242 CELSR2Q9HCU4 2923 aa11.34□□□□□ -0.59
MRPL49-201ENST00000279242 TRBV7-7A0A0K0K1E9 115 aa11.34□□□□□ -0.59
MRPL49-201ENST00000279242 TRBV6-4A0A1B0GX49 114 aa11.34□□□□□ -0.59
MRPL49-201ENST00000279242 SOSTDC1Q6X4U4 206 aa11.34□□□□□ -0.59
MRPL49-201ENST00000279242 OVOL2Q9BRP0 275 aa11.34□□□□□ -0.59
MRPL49-201ENST00000279242 CCL24O00175 119 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 GAGE12JA6NER3 117 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 GAGE7O76087 117 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 GAGE12FP0CL80 117 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 GAGE12GP0CL81 117 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 GAGE12IP0CL82 117 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 GAGE4Q13068 117 aa11.33□□□□□ -0.6
MRPL49-201ENST00000279242 FLNCQ14315 2725 aa11.32□□□□□ -0.6
MRPL49-201ENST00000279242 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
MRPL49-201ENST00000279242 HIST2H2BDQ6DRA6 164 aa11.32□□□□□ -0.6
MRPL49-201ENST00000279242 Q96MF0 132 aa11.31□□□□□ -0.6
MRPL49-201ENST00000279242 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
MRPL49-201ENST00000279242 NDUFA7O95182 113 aa11.3□□□□□ -0.6
MRPL49-201ENST00000279242 NOP10Q9NPE3 64 aaKnown RBP11.3□□□□□ -0.6
MRPL49-201ENST00000279242 CRYBG3Q68DQ2 2970 aa11.3□□□□□ -0.6
MRPL49-201ENST00000279242 COX7B2Q8TF08 81 aa11.3□□□□□ -0.6
MRPL49-201ENST00000279242 MAP1AP78559 2803 aaPredicted RBP11.29□□□□□ -0.6
MRPL49-201ENST00000279242 INAFM2P0DMQ5 153 aa11.29□□□□□ -0.6
MRPL49-201ENST00000279242 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
MRPL49-201ENST00000279242 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
MRPL49-201ENST00000279242 DNAJC9-AS1A6NH13 148 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms