RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 H3BUA1 57 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 NDUFA7O95182 113 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 ESM1Q9NQ30 184 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 ATRQ13535 2644 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 MAST4O15021 2626 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 SOCS3O14543 225 aa11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 DAZ1Q9NQZ3 744 aaKnown RBP11.76□□□□□ -0.53
MAP1LC3B-201ENST00000268607 ADARB2-AS1A8MUL3 147 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 OVOL1O14753 267 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 VWFP04275 2813 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 HERVK_113P63121 156 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 FAM74A4Q5TZK3 123 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 CLEC2BQ92478 149 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 NOTCH3Q9UM47 2321 aa11.75□□□□□ -0.53
MAP1LC3B-201ENST00000268607 FAM240AA0A1B0GVK7 77 aa11.74□□□□□ -0.53
MAP1LC3B-201ENST00000268607 PSMB8P28062 276 aa11.74□□□□□ -0.53
MAP1LC3B-201ENST00000268607 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
MAP1LC3B-201ENST00000268607 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
MAP1LC3B-201ENST00000268607 NXPH4O95158 308 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 Q6ZSV7 163 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 C3orf22Q8N5N4 141 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 FAM19A4Q96LR4 140 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 LY6G6DO95868 133 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 A0A0J9YXY3 114 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 TRBV27A0A0K0K1C4 114 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 CYSRT1A8MQ03 144 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 PRSS2P07478 247 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
MAP1LC3B-201ENST00000268607 H3BT86 120 aa11.72□□□□□ -0.53
MAP1LC3B-201ENST00000268607 C18orf65Q6ZTR6 163 aa11.72□□□□□ -0.53
MAP1LC3B-201ENST00000268607 DNAJC9-AS1A6NH13 148 aa11.71□□□□□ -0.53
MAP1LC3B-201ENST00000268607 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
MAP1LC3B-201ENST00000268607 ZNF702PQ9H963 129 aa11.71□□□□□ -0.54
MAP1LC3B-201ENST00000268607 SYNJ2BPP57105 145 aa11.7□□□□□ -0.54
MAP1LC3B-201ENST00000268607 SPXQ9BT56 116 aa11.7□□□□□ -0.54
MAP1LC3B-201ENST00000268607 INAFM1C9JVW0 142 aa11.7□□□□□ -0.54
MAP1LC3B-201ENST00000268607 NPC2P61916 151 aa11.7□□□□□ -0.54
MAP1LC3B-201ENST00000268607 DEFB136Q30KP8 78 aa11.7□□□□□ -0.54
MAP1LC3B-201ENST00000268607 UQCRQO14949 82 aa11.69□□□□□ -0.54
MAP1LC3B-201ENST00000268607 DEFB121Q5J5C9 76 aa11.69□□□□□ -0.54
MAP1LC3B-201ENST00000268607 APRG1Q8IVJ8 170 aa11.69□□□□□ -0.54
MAP1LC3B-201ENST00000268607 J3KT08 172 aa11.69□□□□□ -0.54
MAP1LC3B-201ENST00000268607 TRAV8-3A0A0A6YYJ7 113 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 COX6CP09669 75 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 KHDC1LQ5JSQ8 128 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 ADAMTSL4-AS1Q5T5F5 129 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 SMCR5Q8TEV8 140 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 LITAFQ99732 161 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 EDA2RQ9HAV5 297 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 IGHV3-30-3P0DP02 117 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 DCANP1Q8TF63 244 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
MAP1LC3B-201ENST00000268607 TRAV12-3A0A0B4J271 114 aa11.67□□□□□ -0.54
MAP1LC3B-201ENST00000268607 A0A0J9YX75 114 aa11.67□□□□□ -0.54
MAP1LC3B-201ENST00000268607 IMUPQ9GZP8 106 aa11.67□□□□□ -0.54
MAP1LC3B-201ENST00000268607 TRBV6-5A0A0K0K1A5 114 aa11.67□□□□□ -0.54
MAP1LC3B-201ENST00000268607 TRRAPQ9Y4A5 3859 aa11.67□□□□□ -0.54
MAP1LC3B-201ENST00000268607 NSUN5P1Q3KNT7 163 aa11.66□□□□□ -0.54
MAP1LC3B-201ENST00000268607 IGLV4-3A0A075B6K6 122 aa11.66□□□□□ -0.54
MAP1LC3B-201ENST00000268607 M0QY20 66 aa11.66□□□□□ -0.54
MAP1LC3B-201ENST00000268607 LST1O00453 97 aa11.66□□□□□ -0.54
MAP1LC3B-201ENST00000268607 C20orf203Q8NBC4 194 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 TRAV12-2A0A075B6T6 113 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 A0A1W2PRX2 142 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 KLLNB2CW77 178 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 I3L3M4 83 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 K7EMT4 169 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
MAP1LC3B-201ENST00000268607 RHOHQ15669 191 aa11.64□□□□□ -0.55
MAP1LC3B-201ENST00000268607 A8MZ25 164 aa11.63□□□□□ -0.55
MAP1LC3B-201ENST00000268607 HOXD3P31249 432 aaPredicted RBP11.63□□□□□ -0.55
MAP1LC3B-201ENST00000268607 A0A1B0GX51 115 aa11.63□□□□□ -0.55
MAP1LC3B-201ENST00000268607 RNASE13Q5GAN3 156 aaKnown RBP11.63□□□□□ -0.55
MAP1LC3B-201ENST00000268607 GAGE2AQ6NT46 116 aa11.62□□□□□ -0.55
MAP1LC3B-201ENST00000268607 SLURP1P55000 103 aa11.62□□□□□ -0.55
MAP1LC3B-201ENST00000268607 NDUFA12Q9UI09 145 aa11.62□□□□□ -0.55
MAP1LC3B-201ENST00000268607 TRAV25A0A0B4J276 109 aa11.61□□□□□ -0.55
MAP1LC3B-201ENST00000268607 LINC00643Q86TS7 51 aa11.61□□□□□ -0.55
MAP1LC3B-201ENST00000268607 FBN1P35555 2871 aaKnown RBP11.61□□□□□ -0.55
MAP1LC3B-201ENST00000268607 ACYP1P07311 99 aa11.61□□□□□ -0.55
MAP1LC3B-201ENST00000268607 IGHV3-16A0A0C4DH30 117 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 CD28P10747 220 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 COX7CP15954 63 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 CYSTM1Q9H1C7 97 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 MIAQ16674 131 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 DAND5Q8N907 189 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 SPANXDQ9BXN6 97 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 SPANXCQ9NY87 97 aa11.6□□□□□ -0.55
MAP1LC3B-201ENST00000268607 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
MAP1LC3B-201ENST00000268607 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
MAP1LC3B-201ENST00000268607 FAM104AQ969W3 186 aa11.59□□□□□ -0.55
MAP1LC3B-201ENST00000268607 C9orf85Q96MD7 179 aa11.59□□□□□ -0.55
MAP1LC3B-201ENST00000268607 STAB1Q9NY15 2570 aa11.59□□□□□ -0.55
MAP1LC3B-201ENST00000268607 UBE2E2Q96LR5 201 aa11.59□□□□□ -0.55
MAP1LC3B-201ENST00000268607 IGHV1-58A0A0C4DH39 117 aa11.58□□□□□ -0.56
MAP1LC3B-201ENST00000268607 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms