RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
COPE-201ENST00000262812 UQCC3Q6UW78 93 aa11.96□□□□□ -0.49
COPE-201ENST00000262812 CLRN3Q8NCR9 226 aa11.96□□□□□ -0.49
COPE-201ENST00000262812 NPYP01303 97 aa11.95□□□□□ -0.5
COPE-201ENST00000262812 ADCYAP1P18509 176 aa11.95□□□□□ -0.5
COPE-201ENST00000262812 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
COPE-201ENST00000262812 Q6ZSA8 131 aa11.95□□□□□ -0.5
COPE-201ENST00000262812 MRPL52Q86TS9 123 aaKnown RBP11.95□□□□□ -0.5
COPE-201ENST00000262812 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
COPE-201ENST00000262812 FAM229AH3BQW9 127 aa11.94□□□□□ -0.5
COPE-201ENST00000262812 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
COPE-201ENST00000262812 LINC00959A0A1B0GUT2 108 aa11.93□□□□□ -0.5
COPE-201ENST00000262812 PPBPP02775 128 aa11.93□□□□□ -0.5
COPE-201ENST00000262812 XCL1P47992 114 aa11.93□□□□□ -0.5
COPE-201ENST00000262812 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
COPE-201ENST00000262812 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
COPE-201ENST00000262812 CCL25O15444 150 aa11.92□□□□□ -0.5
COPE-201ENST00000262812 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
COPE-201ENST00000262812 ORMDL3Q8N138 153 aa11.92□□□□□ -0.5
COPE-201ENST00000262812 PRELID3AQ96N28 172 aa11.92□□□□□ -0.5
COPE-201ENST00000262812 SMIM2Q9BVW6 85 aa11.92□□□□□ -0.5
COPE-201ENST00000262812 UBE2D4Q9Y2X8 147 aa11.92□□□□□ -0.5
COPE-201ENST00000262812 TCAPO15273 167 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
COPE-201ENST00000262812 FOXI1Q12951 378 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 SS18Q15532 418 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
COPE-201ENST00000262812 SCXQ7RTU7 201 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 C15orf56Q8N910 161 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
COPE-201ENST00000262812 SLPIP03973 132 aa11.9□□□□□ -0.5
COPE-201ENST00000262812 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
COPE-201ENST00000262812 TMEM18Q96B42 140 aa11.9□□□□□ -0.5
COPE-201ENST00000262812 CHAC1Q9BUX1 264 aa11.9□□□□□ -0.5
COPE-201ENST00000262812 VPS13BQ7Z7G8 4022 aa11.89□□□□□ -0.51
COPE-201ENST00000262812 LOC389332A0A1B0GUA5 103 aa11.89□□□□□ -0.51
COPE-201ENST00000262812 PHOX2AO14813 284 aa11.89□□□□□ -0.51
COPE-201ENST00000262812 INAFM2P0DMQ5 153 aa11.89□□□□□ -0.51
COPE-201ENST00000262812 RPL39P62891 51 aaKnown RBP11.89□□□□□ -0.51
COPE-201ENST00000262812 RAB5AP20339 215 aa11.88□□□□□ -0.51
COPE-201ENST00000262812 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
COPE-201ENST00000262812 CIRBP-AS1Q8TBR5 109 aa11.88□□□□□ -0.51
COPE-201ENST00000262812 SEC11CQ9BY50 192 aa11.88□□□□□ -0.51
COPE-201ENST00000262812 CSDC2Q9Y534 153 aaKnown RBP11.88□□□□□ -0.51
COPE-201ENST00000262812 SDIM1Q6ZPB5 146 aa11.87□□□□□ -0.51
COPE-201ENST00000262812 IMMP2LQ96T52 175 aa11.87□□□□□ -0.51
COPE-201ENST00000262812 CTDSP1Q9GZU7 261 aa11.87□□□□□ -0.51
COPE-201ENST00000262812 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.86□□□□□ -0.51
COPE-201ENST00000262812 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
COPE-201ENST00000262812 Q6ZUT4 128 aa11.86□□□□□ -0.51
COPE-201ENST00000262812 LINC00528Q8N1L1 170 aa11.86□□□□□ -0.51
COPE-201ENST00000262812 TIMM21Q9BVV7 248 aa11.86□□□□□ -0.51
COPE-201ENST00000262812 SRRM2Q9UQ35 2752 aaKnown RBP11.85□□□□□ -0.51
COPE-201ENST00000262812 IGHV3-64A0A075B6Q5 118 aa11.85□□□□□ -0.51
COPE-201ENST00000262812 CD164L2Q6UWJ8 174 aa11.85□□□□□ -0.51
COPE-201ENST00000262812 OPRPNQ99935 248 aaPredicted RBP11.85□□□□□ -0.51
COPE-201ENST00000262812 C1orf196B1AJZ1 125 aa11.84□□□□□ -0.51
COPE-201ENST00000262812 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
COPE-201ENST00000262812 MAP1LC3AQ9H492 121 aa11.84□□□□□ -0.51
COPE-201ENST00000262812 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.84□□□□□ -0.51
COPE-201ENST00000262812 PANO1I0J062 215 aa11.83□□□□□ -0.52
COPE-201ENST00000262812 LINC00526Q96FQ7 95 aa11.83□□□□□ -0.52
COPE-201ENST00000262812 LAMTOR2Q9Y2Q5 125 aa11.83□□□□□ -0.52
COPE-201ENST00000262812 GVQW2A0A096LPI5 108 aaPredicted RBP11.82□□□□□ -0.52
COPE-201ENST00000262812 IGHV1-58A0A0C4DH39 117 aa11.82□□□□□ -0.52
COPE-201ENST00000262812 PRSS47A8MTI9 375 aa11.82□□□□□ -0.52
COPE-201ENST00000262812 KIAA1644Q3SXP7 199 aa11.82□□□□□ -0.52
COPE-201ENST00000262812 PLA2G1BP04054 148 aaKnown RBP11.81□□□□□ -0.52
COPE-201ENST00000262812 MALP21145 153 aa11.81□□□□□ -0.52
COPE-201ENST00000262812 S100PP25815 95 aa11.81□□□□□ -0.52
COPE-201ENST00000262812 Q8N8P6 123 aa11.81□□□□□ -0.52
COPE-201ENST00000262812 FAM104AQ969W3 186 aa11.81□□□□□ -0.52
COPE-201ENST00000262812 SPANXA1Q9NS26 97 aa11.81□□□□□ -0.52
COPE-201ENST00000262812 COX7A2LO14548 114 aa11.8□□□□□ -0.52
COPE-201ENST00000262812 C5orf38Q86SI9 138 aa11.8□□□□□ -0.52
COPE-201ENST00000262812 CHTF8P0CG12 524 aa11.79□□□□□ -0.52
COPE-201ENST00000262812 COX6A2Q02221 97 aa11.79□□□□□ -0.52
COPE-201ENST00000262812 C10orf91Q5T1B1 145 aa11.79□□□□□ -0.52
COPE-201ENST00000262812 RPS10P5Q9NQ39 176 aa11.79□□□□□ -0.52
COPE-201ENST00000262812 TRAV9-1A0A075B6T8 112 aa11.78□□□□□ -0.52
COPE-201ENST00000262812 ZNF561-AS1K7EIQ3 104 aa11.78□□□□□ -0.52
COPE-201ENST00000262812 IFI27P40305 119 aaPredicted RBP11.78□□□□□ -0.52
COPE-201ENST00000262812 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
COPE-201ENST00000262812 IFITM10A6NMD0 228 aa11.77□□□□□ -0.53
COPE-201ENST00000262812 PRSS3P2Q8NHM4 247 aa11.77□□□□□ -0.53
COPE-201ENST00000262812 CARHSP1Q9Y2V2 147 aaKnown RBP11.77□□□□□ -0.53
COPE-201ENST00000262812 IGLV4-69A0A075B6H9 119 aa11.75□□□□□ -0.53
COPE-201ENST00000262812 RHEBQ15382 184 aa11.75□□□□□ -0.53
COPE-201ENST00000262812 PYGO1Q9Y3Y4 419 aa11.75□□□□□ -0.53
COPE-201ENST00000262812 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 ORMDL2Q53FV1 153 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 C2orf66Q6UXQ4 117 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 CARD19Q96LW7 228 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 GNB1LQ9BYB4 327 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 NXT2Q9NPJ8 142 aaKnown RBP11.74□□□□□ -0.53
COPE-201ENST00000262812 CYSLTR1Q9Y271 337 aa11.74□□□□□ -0.53
COPE-201ENST00000262812 A0A087WYN8 130 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms