RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 TRBV6-5A0A0K0K1A5 114 aa10.23□□□□□ -0.77
CDH1-201ENST00000261769 RBX1P62877 108 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 B9D2Q9BPU9 175 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 ODF1Q14990 250 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 IGLV2-11P01706 119 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
CDH1-201ENST00000261769 C9orf85Q96MD7 179 aa10.22□□□□□ -0.77
CDH1-201ENST00000261769 A4D1N5 150 aa10.21□□□□□ -0.77
CDH1-201ENST00000261769 CPAMD8Q8IZJ3 1885 aa10.21□□□□□ -0.78
CDH1-201ENST00000261769 NHLRC4P0CG21 123 aaPredicted RBP10.21□□□□□ -0.78
CDH1-201ENST00000261769 NCR3O14931 201 aa10.21□□□□□ -0.78
CDH1-201ENST00000261769 SYCNQ0VAF6 134 aa10.21□□□□□ -0.78
CDH1-201ENST00000261769 Q8N2B8 174 aa10.2□□□□□ -0.78
CDH1-201ENST00000261769 Q8N976 141 aa10.2□□□□□ -0.78
CDH1-201ENST00000261769 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
CDH1-201ENST00000261769 CDPF1Q6NVV7 123 aa10.2□□□□□ -0.78
CDH1-201ENST00000261769 NUPR1O60356 82 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 PRR9Q5T870 116 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 PPDPFLQ8WWR9 84 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 EXPH5Q8NEV8 1989 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 BAALC-AS2P0C853 105 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 DAND5Q8N907 189 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 M0R2N4 97 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 U3KQK5 164 aa10.19□□□□□ -0.78
CDH1-201ENST00000261769 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
CDH1-201ENST00000261769 CITED1Q99966 193 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 F8W1H4 67 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 K7ERJ3 54 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 HIGD1BQ9P298 99 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 ATG2AQ2TAZ0 1938 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 CLUHP3Q96NS8 147 aa10.18□□□□□ -0.78
CDH1-201ENST00000261769 A0A1W2PPM0 123 aa10.17□□□□□ -0.78
CDH1-201ENST00000261769 CDKN2A-AS1Q9UH64 79 aa10.17□□□□□ -0.78
CDH1-201ENST00000261769 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
CDH1-201ENST00000261769 hADV29S1A0JD25 119 aa10.17□□□□□ -0.78
CDH1-201ENST00000261769 SPATA12Q7Z6I5 190 aa10.17□□□□□ -0.78
CDH1-201ENST00000261769 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
CDH1-201ENST00000261769 DSCAML1Q8TD84 2053 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 A0A087WZ39 114 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 C11orf21Q9P2W6 132 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 RETNQ9HD89 108 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 PTPRBP23467 1997 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 NDUFB1O75438 58 aa10.16□□□□□ -0.78
CDH1-201ENST00000261769 EDN2P20800 178 aa10.15□□□□□ -0.78
CDH1-201ENST00000261769 ANAPC13Q9BS18 74 aa10.15□□□□□ -0.78
CDH1-201ENST00000261769 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
CDH1-201ENST00000261769 K7EP34 96 aa10.15□□□□□ -0.79
CDH1-201ENST00000261769 COX7BP24311 80 aa10.15□□□□□ -0.79
CDH1-201ENST00000261769 SPANXCQ9NY87 97 aa10.15□□□□□ -0.79
CDH1-201ENST00000261769 IBA57-AS1B1ANH7 110 aa10.14□□□□□ -0.79
CDH1-201ENST00000261769 HIGD2AQ9BW72 106 aa10.14□□□□□ -0.79
CDH1-201ENST00000261769 HECTD1Q9ULT8 2610 aa10.14□□□□□ -0.79
CDH1-201ENST00000261769 ETDBQ3ZM63 59 aa10.14□□□□□ -0.79
CDH1-201ENST00000261769 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
CDH1-201ENST00000261769 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
CDH1-201ENST00000261769 PRM2P04554 102 aa10.13□□□□□ -0.79
CDH1-201ENST00000261769 UBE2D3P61077 147 aa10.13□□□□□ -0.79
CDH1-201ENST00000261769 UBE2D2P62837 147 aa10.13□□□□□ -0.79
CDH1-201ENST00000261769 H3BMG7 143 aa10.12□□□□□ -0.79
CDH1-201ENST00000261769 C9orf153Q5TBE3 101 aa10.12□□□□□ -0.79
CDH1-201ENST00000261769 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
CDH1-201ENST00000261769 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
CDH1-201ENST00000261769 TRACP01848 142 aa10.11□□□□□ -0.79
CDH1-201ENST00000261769 ZNF22P17026 224 aaPredicted RBP10.11□□□□□ -0.79
CDH1-201ENST00000261769 IGLV4-69A0A075B6H9 119 aa10.11□□□□□ -0.79
CDH1-201ENST00000261769 TSHBP01222 138 aa10.11□□□□□ -0.79
CDH1-201ENST00000261769 POLR2KP53803 58 aaKnown RBP10.1□□□□□ -0.79
CDH1-201ENST00000261769 Q6ZTC4 211 aa10.1□□□□□ -0.79
CDH1-201ENST00000261769 LECT2O14960 151 aa10.1□□□□□ -0.79
CDH1-201ENST00000261769 NTN5Q8WTR8 489 aaPredicted RBP10.1□□□□□ -0.79
CDH1-201ENST00000261769 MRPS36P82909 103 aaKnown RBP10.1□□□□□ -0.79
CDH1-201ENST00000261769 KRTAP24-1Q3LI83 254 aa10.1□□□□□ -0.79
CDH1-201ENST00000261769 NDUFS5O43920 106 aa10.1□□□□□ -0.79
CDH1-201ENST00000261769 CNFNQ9BYD5 112 aa10.1□□□□□ -0.79
CDH1-201ENST00000261769 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
CDH1-201ENST00000261769 JMJD7-PLA2G4BH0Y9G9 81 aa10.09□□□□□ -0.79
CDH1-201ENST00000261769 SPANXDQ9BXN6 97 aa10.09□□□□□ -0.79
CDH1-201ENST00000261769 LINC00959A0A1B0GUT2 108 aa10.09□□□□□ -0.79
CDH1-201ENST00000261769 FAM19A1Q7Z5A9 133 aa10.09□□□□□ -0.79
CDH1-201ENST00000261769 LINC00474Q9P2X8 69 aa10.09□□□□□ -0.79
CDH1-201ENST00000261769 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
CDH1-201ENST00000261769 TNRC6BQ9UPQ9 1833 aaKnown RBP10.08□□□□□ -0.8
CDH1-201ENST00000261769 LRCOL1A6NCL2 159 aa10.08□□□□□ -0.8
CDH1-201ENST00000261769 G3V4G9 280 aa10.07□□□□□ -0.8
CDH1-201ENST00000261769 NRACQ8N912 160 aa10.07□□□□□ -0.8
CDH1-201ENST00000261769 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
CDH1-201ENST00000261769 FAM19A5Q7Z5A7 132 aaPredicted RBP10.07□□□□□ -0.8
CDH1-201ENST00000261769 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
CDH1-201ENST00000261769 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
CDH1-201ENST00000261769 RNASE8Q8TDE3 154 aaKnown RBP10.07□□□□□ -0.8
CDH1-201ENST00000261769 NREPQ16612 68 aa10.06□□□□□ -0.8
CDH1-201ENST00000261769 TMEM256-PLSCR3K7ERE1 68 aa10.06□□□□□ -0.8
CDH1-201ENST00000261769 BEAN1Q3B7T3 259 aa10.06□□□□□ -0.8
CDH1-201ENST00000261769 PDE6GP18545 87 aa10.05□□□□□ -0.8
CDH1-201ENST00000261769 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms