RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 COPS9Q8WXC6 57 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 Q9H8V8 135 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 IGHV1OR15-1A0A075B7D0 117 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 F5H768 121 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 OXTP01178 125 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 HRCT1Q6UXD1 115 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 SIRPDQ9H106 197 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 SORL1Q92673 2214 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 ITPR1Q14643 2758 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-201ENST00000261443 IGKV2-29A2NJV5 120 aaPredicted RBP5.27□□□□□ -1.57
CSDE1-201ENST00000261443 RNF152Q8N8N0 203 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 UPK3BQ9BT76 320 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 UBE2D4Q9Y2X8 147 aa5.27□□□□□ -1.57
CSDE1-201ENST00000261443 IGHG2P01859 326 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 PROK1P58294 105 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 SOSTDC1Q6X4U4 206 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 PTPN13Q12923 2485 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 A0A087WVE0 104 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 HOXD3P31249 432 aaPredicted RBP5.26□□□□□ -1.57
CSDE1-201ENST00000261443 SYNJ2BPP57105 145 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 FLNCQ14315 2725 aa5.26□□□□□ -1.57
CSDE1-201ENST00000261443 CHCHD7Q9BUK0 85 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 FAM208BQ5VWN6 2430 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 SPINK13Q1W4C9 94 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 C19orf54Q5BKX5 351 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 Q5XG85 94 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 Q6JHZ5 121 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 C14orf132Q9NPU4 83 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 SONP18583 2426 aaKnown RBP5.25□□□□□ -1.57
CSDE1-201ENST00000261443 USP17L23D6RBM5 183 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 EDN2P20800 178 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 LINC00467Q9BRT7 94 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 MYO18BQ8IUG5 2567 aa5.25□□□□□ -1.57
CSDE1-201ENST00000261443 HTN1P15515 57 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 COX6A2Q02221 97 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 ZNF415Q09FC8 603 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 HIST2H2BCQ6DN03 193 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 HIST2H2BDQ6DRA6 164 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-201ENST00000261443 LINC00846Q9NV44 126 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 MOB4Q9Y3A3 225 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 DGAT2L7PQ6IED9 249 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 LINC01561Q8N1V8 128 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 USMG5Q96IX5 58 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 Q9UF83 564 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 HIVEP3Q5T1R4 2406 aa5.24□□□□□ -1.57
CSDE1-201ENST00000261443 IGLV5-45A0A087WSX0 123 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 GRNP28799 593 aaKnown RBP5.23□□□□□ -1.57
CSDE1-201ENST00000261443 C9orf129Q5T035 196 aaKnown RBP5.23□□□□□ -1.57
CSDE1-201ENST00000261443 MYO9AB2RTY4 2548 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 C2CD3Q4AC94 2353 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 IGHV3-38A0A0C4DH36 116 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 KNCNA6PVL3 124 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 PIK3CD-AS1Q5SR53 167 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 C10orf105Q8TEF2 133 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 USP9XQ93008 2570 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-201ENST00000261443 IGLV5-39A0A0G2JS06 123 aa5.23□□□□□ -1.57
CSDE1-201ENST00000261443 TRAV13-2A0A0B4J235 113 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 RPL28P46779 137 aaKnown RBP5.22□□□□□ -1.57
CSDE1-201ENST00000261443 SNRPD3P62318 126 aaKnown RBP5.22□□□□□ -1.57
CSDE1-201ENST00000261443 CDSNQ15517 529 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 MRAPQ8TCY5 172 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 OVOL2Q9BRP0 275 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 ACACBO00763 2458 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 CRPP02741 224 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 FHL2Q14192 279 aa5.22□□□□□ -1.57
CSDE1-201ENST00000261443 A0A087WYN8 130 aa5.21□□□□□ -1.57
CSDE1-201ENST00000261443 Q6ZSN1 163 aa5.21□□□□□ -1.57
CSDE1-201ENST00000261443 SMIM1B2RUZ4 78 aa5.21□□□□□ -1.58
CSDE1-201ENST00000261443 PF4P02776 101 aa5.21□□□□□ -1.58
CSDE1-201ENST00000261443 LINC00242Q5T6M2 205 aa5.21□□□□□ -1.58
CSDE1-201ENST00000261443 PRORYQ9H606 182 aa5.21□□□□□ -1.58
CSDE1-201ENST00000261443 ABCA12Q86UK0 2595 aa5.21□□□□□ -1.58
CSDE1-201ENST00000261443 IGHV3OR16-12A0A075B7B8 117 aa5.21□□□□□ -1.58
CSDE1-201ENST00000261443 H3BUA1 57 aa5.2□□□□□ -1.58
CSDE1-201ENST00000261443 K7EMT4 169 aa5.2□□□□□ -1.58
CSDE1-201ENST00000261443 NCR3O14931 201 aa5.2□□□□□ -1.58
CSDE1-201ENST00000261443 NDUFC2O95298 119 aa5.2□□□□□ -1.58
CSDE1-201ENST00000261443 C11orf71Q6IPW1 123 aa5.2□□□□□ -1.58
CSDE1-201ENST00000261443 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
CSDE1-201ENST00000261443 LINC00337Q8N6G1 96 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 CCDC168Q8NDH2 2452 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 NDUFC2-KCTD14E9PQ53 114 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 GHRHP01286 108 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 LY6EQ16553 131 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 SMIM11BQ8TCY0 68 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.589e-7■■□□□ 11.9
CSDE1-201ENST00000261443 H0YGX0 51 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 PRM2P04554 102 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 RBMY1A1P0DJD3 496 aaKnown RBP5.19□□□□□ -1.58
CSDE1-201ENST00000261443 RBMY1CP0DJD4 496 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 HILS1P60008 231 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 RBMY1FQ15415 496 aaKnown RBP5.19□□□□□ -1.58
CSDE1-201ENST00000261443 TMEM243Q9BU79 118 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 WNK1Q9H4A3 2382 aa5.19□□□□□ -1.58
CSDE1-201ENST00000261443 LRRK2Q5S007 2527 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 FBN2P35556 2912 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 TRAV23DV6A0A075B6W5 121 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 RBMY1BA6NDE4 496 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms