RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LINC01546A6NGU7 62 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 LINC01356Q8N9X3 169 aa4.92□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV4OR15-8A0A075B7B6 117 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 IGHV4-30-2A0A087WSY4 118 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 A0A087WW49 117 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 A0A087WYN8 130 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 LINC01600Q96MT4 127 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 COL4A2P08572 1712 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 IGLV2-11P01706 119 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 C9orf47Q6ZRZ4 202 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 URB1O60287 2271 aaKnown RBP4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 LHBP01229 141 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 CDKN2A-AS1Q9UH64 79 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 CEP290O15078 2479 aa4.91□□□□□ -1.62
PDGFRA-201ENST00000257290 COX7BP24311 80 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 TRGV4A0A0C4DH28 118 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 IGIPA6NJ69 53 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 H0Y9J4 135 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 DEFB105AQ8NG35 78 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 IBA57-AS1B1ANH7 110 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 C19orf84I3L1E1 186 aa4.9□□□□□ -1.62
PDGFRA-201ENST00000257290 FREM1Q5H8C1 2179 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 RTTNQ86VV8 2226 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 AVPP01185 164 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 DNAJC9-AS1A6NH13 148 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 C3orf84H3BNL1 204 aa4.9□□□□□ -1.63
PDGFRA-201ENST00000257290 ARFGEF3Q5TH69 2177 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 COL5A1P20908 1838 aaPredicted RBP4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 GAS8-AS1O95177 125 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 NCOA6Q14686 2063 aaPredicted RBP4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 IGKV1D-37A0A075B6S9 117 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 FBXL19-AS1Q494R0 122 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 Q8N814 137 aa4.89□□□□□ -1.63
PDGFRA-201ENST00000257290 ADAMTS9Q9P2N4 1935 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGLV2-18A0A075B6J9 118 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV4-4A0A075B6R2 117 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 MSMBP08118 114 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 WFDC10BQ8IUB3 73 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 Q8NA96 180 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 FSHBP01225 129 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGKV1-17P01599 117 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV4-59P01825 116 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 LINC00467Q9BRT7 94 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 J3QKU1 62 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 USMG5Q96IX5 58 aa4.88□□□□□ -1.63
PDGFRA-201ENST00000257290 DAZAP2Q15038 168 aaPredicted RBP4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 Q6ZQY7 126 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 TRGV1A0A0A0MS02 117 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 ATP6V0E1O15342 81 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 UNQ9165/PRO28630Q6UXU0 137 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 PHF5AQ7RTV0 110 aaKnown RBP4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 Q6ZPA2 131 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 CYSTM1Q9H1C7 97 aa4.87□□□□□ -1.63
PDGFRA-201ENST00000257290 H3BUX3 64 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV3-11P01762 117 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 BRD3OSQ6XYD6 125 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 CTSZQ9UBR2 303 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 DNAJC13O75165 2243 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 EML6Q6ZMW3 1958 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 I3L2K1 104 aa4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 POLR2KP53803 58 aaKnown RBP4.86□□□□□ -1.63
PDGFRA-201ENST00000257290 DOCK10Q96BY6 2186 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 PRAC2D3DTV9 90 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 PSCAO43653 123 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 ASXL3Q9C0F0 2248 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 ZNRD1Q9P1U0 126 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 PRR14LQ5THK1 2151 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 NCOR1O75376 2440 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 LINC00313P59037 77 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 IGHV3-16A0A0C4DH30 117 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 BRWD1-AS2P59051 145 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 CEP192Q8TEP8 1941 aa4.85□□□□□ -1.63
PDGFRA-201ENST00000257290 ATG2AQ2TAZ0 1938 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 DOPEY2Q9Y3R5 2298 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 H0Y9P7 68 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 H3BPC8 53 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 OVOL3O00110 214 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 ZDBF2Q9HCK1 2354 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 TECTAO75443 2155 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 LOC100131303A0A0U1RQF7 123 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 CMC4P56277 68 aaPredicted RBP4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 BBC3Q96PG8 261 aaPredicted RBP4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 RNF223E7ERA6 249 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 KIF25-AS1Q9Y6Z4 181 aa4.84□□□□□ -1.63
PDGFRA-201ENST00000257290 A0A0J9YWU9 116 aa4.84□□□□□ -1.64
PDGFRA-201ENST00000257290 IGHV3-53P01767 116 aa4.84□□□□□ -1.64
PDGFRA-201ENST00000257290 RHPN1-AS1Q9BWJ2 59 aa4.84□□□□□ -1.64
PDGFRA-201ENST00000257290 WISP2O76076 250 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 CADP27708 2225 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 ZNF843Q8N446 348 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 CRIP3Q6Q6R5 217 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
PDGFRA-201ENST00000257290 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms