RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 NOP10Q9NPE3 64 aaKnown RBP13.98□□□□□ -0.17
CDC42EP1-201ENST00000249014 C19orf73Q9NVV2 129 aa13.98□□□□□ -0.17
CDC42EP1-201ENST00000249014 K7EQD1 137 aa13.97□□□□□ -0.17
CDC42EP1-201ENST00000249014 LINC00694P0DN24 101 aa13.97□□□□□ -0.17
CDC42EP1-201ENST00000249014 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.96□□□□□ -0.17
CDC42EP1-201ENST00000249014 NDUFA12Q9UI09 145 aa13.96□□□□□ -0.17
CDC42EP1-201ENST00000249014 TRAV4A0A0B4J268 109 aa13.96□□□□□ -0.18
CDC42EP1-201ENST00000249014 PLAC8L1A1L4L8 177 aa13.96□□□□□ -0.18
CDC42EP1-201ENST00000249014 RPL35AP18077 110 aaKnown RBP13.96□□□□□ -0.18
CDC42EP1-201ENST00000249014 GEMIN7Q9H840 131 aaKnown RBP13.96□□□□□ -0.18
CDC42EP1-201ENST00000249014 CDKN2A-AS1Q9UH64 79 aa13.96□□□□□ -0.18
CDC42EP1-201ENST00000249014 TCL1BO95988 128 aa13.95□□□□□ -0.18
CDC42EP1-201ENST00000249014 ADAMTSL4-AS1Q5T5F5 129 aa13.95□□□□□ -0.18
CDC42EP1-201ENST00000249014 NTM-AS1Q6ZSK4 140 aa13.95□□□□□ -0.18
CDC42EP1-201ENST00000249014 RPL36AP83881 106 aaKnown RBP13.95□□□□□ -0.18
CDC42EP1-201ENST00000249014 DGAT2L7PQ6IED9 249 aa13.95□□□□□ -0.18
CDC42EP1-201ENST00000249014 RPL36ALQ969Q0 106 aaKnown RBP13.95□□□□□ -0.18
CDC42EP1-201ENST00000249014 HELZ2Q9BYK8 2649 aaKnown RBP13.94□□□□□ -0.18
CDC42EP1-201ENST00000249014 A0A0B4J2C4 111 aa13.94□□□□□ -0.18
CDC42EP1-201ENST00000249014 TRBV10-1A0A0K0K1A3 114 aa13.94□□□□□ -0.18
CDC42EP1-201ENST00000249014 IGHV3-33P01772 117 aa13.94□□□□□ -0.18
CDC42EP1-201ENST00000249014 COX6A2Q02221 97 aa13.94□□□□□ -0.18
CDC42EP1-201ENST00000249014 J3QKU1 62 aa13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 HILS1P60008 231 aa13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 DAZ2Q13117 558 aaKnown RBP13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 LYRM7Q5U5X0 104 aa13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 IGLV5-45A0A087WSX0 123 aa13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 INSL3P51460 131 aa13.93□□□□□ -0.18
CDC42EP1-201ENST00000249014 UNC79Q9P2D8 2635 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE12JA6NER3 117 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 NDUFA7O95182 113 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 TIRAPP58753 221 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE4Q13068 117 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE5Q13069 117 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 ZFAND6Q6FIF0 208 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 CSNK1G2-AS1Q8NCQ2 148 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 ZNF418Q8TF45 676 aaPredicted RBP13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 SMR3AQ99954 134 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 FAM110AQ9BQ89 295 aa13.92□□□□□ -0.18
CDC42EP1-201ENST00000249014 DAZ4Q86SG3 579 aaKnown RBP13.91□□□□□ -0.18
CDC42EP1-201ENST00000249014 DAZ3Q9NR90 486 aaKnown RBP13.91□□□□□ -0.18
CDC42EP1-201ENST00000249014 H7C2G1 150 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 LINC00242Q5T6M2 205 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 C16orf74Q96GX8 76 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 TMEM101Q96IK0 257 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 TRBV20-1A0A075B6N2 111 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE7O76087 117 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 PRSS2P07478 247 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE12FP0CL80 117 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE12GP0CL81 117 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 GAGE12IP0CL82 117 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 SCGB1C2P0DMR2 95 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 SBSPONQ8IVN8 264 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 SPANXDQ9BXN6 97 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 SPANXCQ9NY87 97 aa13.9□□□□□ -0.18
CDC42EP1-201ENST00000249014 ERG28Q9UKR5 140 aa13.89□□□□□ -0.19
CDC42EP1-201ENST00000249014 CSDC2Q9Y534 153 aaKnown RBP13.89□□□□□ -0.19
CDC42EP1-201ENST00000249014 TRGV2A0A075B6R0 118 aa13.88□□□□□ -0.19
CDC42EP1-201ENST00000249014 J3QR89 54 aa13.88□□□□□ -0.19
CDC42EP1-201ENST00000249014 MIAQ16674 131 aa13.88□□□□□ -0.19
CDC42EP1-201ENST00000249014 C1QTNF4Q9BXJ3 329 aa13.88□□□□□ -0.19
CDC42EP1-201ENST00000249014 LOC100131303A0A0U1RQF7 123 aa13.87□□□□□ -0.19
CDC42EP1-201ENST00000249014 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
CDC42EP1-201ENST00000249014 NPC2P61916 151 aa13.87□□□□□ -0.19
CDC42EP1-201ENST00000249014 HERVK_113P63121 156 aa13.86□□□□□ -0.19
CDC42EP1-201ENST00000249014 C2CD3Q4AC94 2353 aa13.86□□□□□ -0.19
CDC42EP1-201ENST00000249014 FAM19A3Q7Z5A8 133 aa13.86□□□□□ -0.19
CDC42EP1-201ENST00000249014 OVOL2Q9BRP0 275 aa13.86□□□□□ -0.19
CDC42EP1-201ENST00000249014 TRAV13-1A0A0B4J241 112 aa13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 NDUFA1O15239 70 aa13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 FOXI1Q12951 378 aa13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 CDC42SE2Q9NRR3 84 aa13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 FASNP49327 2511 aaKnown RBP13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 ATP6V0E2Q8NHE4 81 aa13.85□□□□□ -0.19
CDC42EP1-201ENST00000249014 Q1RN00 199 aa13.84□□□□□ -0.19
CDC42EP1-201ENST00000249014 DAND5Q8N907 189 aa13.84□□□□□ -0.19
CDC42EP1-201ENST00000249014 GAGE12HA6NDE8 117 aa13.83□□□□□ -0.19
CDC42EP1-201ENST00000249014 TIMM17BO60830 172 aa13.83□□□□□ -0.2
CDC42EP1-201ENST00000249014 GTSF1LQ9H1H1 148 aa13.83□□□□□ -0.2
CDC42EP1-201ENST00000249014 TRBV6-4A0A1B0GX49 114 aa13.82□□□□□ -0.2
CDC42EP1-201ENST00000249014 SMIM1B2RUZ4 78 aa13.82□□□□□ -0.2
CDC42EP1-201ENST00000249014 HIVEP2P31629 2446 aa13.82□□□□□ -0.2
CDC42EP1-201ENST00000249014 SPATA25Q9BR10 227 aa13.81□□□□□ -0.2
CDC42EP1-201ENST00000249014 TMEM243Q9BU79 118 aa13.81□□□□□ -0.2
CDC42EP1-201ENST00000249014 Q9H8V8 135 aa13.81□□□□□ -0.2
CDC42EP1-201ENST00000249014 TRGV4A0A0C4DH28 118 aa13.81□□□□□ -0.2
CDC42EP1-201ENST00000249014 TRIAP1O43715 76 aa13.81□□□□□ -0.2
CDC42EP1-201ENST00000249014 TEN1Q86WV5 123 aa13.81□□□□□ -0.2
CDC42EP1-201ENST00000249014 UBE2L6O14933 153 aa13.8□□□□□ -0.2
CDC42EP1-201ENST00000249014 CARD19Q96LW7 228 aa13.8□□□□□ -0.2
CDC42EP1-201ENST00000249014 TRBV30A0A0K0K1B3 111 aa13.79□□□□□ -0.2
CDC42EP1-201ENST00000249014 F5H768 121 aa13.79□□□□□ -0.2
CDC42EP1-201ENST00000249014 FHL2Q14192 279 aa13.79□□□□□ -0.2
CDC42EP1-201ENST00000249014 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
CDC42EP1-201ENST00000249014 C9JAW5 83 aa13.78□□□□□ -0.2
CDC42EP1-201ENST00000249014 CIDEAO60543 219 aa13.78□□□□□ -0.2
CDC42EP1-201ENST00000249014 LINC00482Q8N8I6 264 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms