RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 Q96MF0 132 aa11.74□□□□□ -0.53
LTBR-201ENST00000228918 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
LTBR-201ENST00000228918 GAGE2BQ13066 116 aa11.73□□□□□ -0.53
LTBR-201ENST00000228918 GAGE2EQ4V326 116 aa11.73□□□□□ -0.53
LTBR-201ENST00000228918 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
LTBR-201ENST00000228918 GAGE2DQ9UEU5 116 aa11.73□□□□□ -0.53
LTBR-201ENST00000228918 TRBV30A0A0K0K1B3 111 aa11.72□□□□□ -0.53
LTBR-201ENST00000228918 PRSS2P07478 247 aa11.72□□□□□ -0.53
LTBR-201ENST00000228918 BBC3Q96PG8 261 aaPredicted RBP11.72□□□□□ -0.53
LTBR-201ENST00000228918 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
LTBR-201ENST00000228918 ATXN8Q156A1 80 aa11.72□□□□□ -0.53
LTBR-201ENST00000228918 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
LTBR-201ENST00000228918 TRIAP1O43715 76 aa11.71□□□□□ -0.53
LTBR-201ENST00000228918 Q6ZSV7 163 aa11.71□□□□□ -0.53
LTBR-201ENST00000228918 CDKN2A-AS1Q9UH64 79 aa11.71□□□□□ -0.53
LTBR-201ENST00000228918 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
LTBR-201ENST00000228918 TIRAPP58753 221 aa11.71□□□□□ -0.54
LTBR-201ENST00000228918 C1orf158Q8N1D5 194 aa11.71□□□□□ -0.54
LTBR-201ENST00000228918 CHD6Q8TD26 2715 aa11.71□□□□□ -0.54
LTBR-201ENST00000228918 GAGE12JA6NER3 117 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 SNCGO76070 127 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 GAGE7O76087 117 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 GAGE4Q13068 117 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 LINC01620Q4KN68 170 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 Q6Q795 121 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 KRTAP1-3Q8IUG1 177 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 TMEM86BQ8N661 226 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 ZNF469Q96JG9 3925 aaPredicted RBP11.7□□□□□ -0.54
LTBR-201ENST00000228918 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 TIMM17BO60830 172 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 CRLF1O75462 422 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 STHQ8IWL8 128 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
LTBR-201ENST00000228918 CFAP161Q6P656 301 aa11.69□□□□□ -0.54
LTBR-201ENST00000228918 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.69□□□□□ -0.54
LTBR-201ENST00000228918 IGHV3OR16-12A0A075B7B8 117 aa11.69□□□□□ -0.54
LTBR-201ENST00000228918 NPC2P61916 151 aa11.69□□□□□ -0.54
LTBR-201ENST00000228918 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
LTBR-201ENST00000228918 YAE1D1Q9NRH1 226 aa11.69□□□□□ -0.54
LTBR-201ENST00000228918 ICOSQ9Y6W8 199 aa11.69□□□□□ -0.54
LTBR-201ENST00000228918 TRGV1A0A0A0MS02 117 aa11.68□□□□□ -0.54
LTBR-201ENST00000228918 CCDC179H3BU77 68 aa11.68□□□□□ -0.54
LTBR-201ENST00000228918 NDUFA1O15239 70 aa11.68□□□□□ -0.54
LTBR-201ENST00000228918 IFITM1P13164 125 aa11.68□□□□□ -0.54
LTBR-201ENST00000228918 TMEM101Q96IK0 257 aa11.68□□□□□ -0.54
LTBR-201ENST00000228918 TLN2Q9Y4G6 2542 aa11.68□□□□□ -0.54
LTBR-201ENST00000228918 FAM110AQ9BQ89 295 aa11.67□□□□□ -0.54
LTBR-201ENST00000228918 COX6A2Q02221 97 aa11.67□□□□□ -0.54
LTBR-201ENST00000228918 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
LTBR-201ENST00000228918 ZNF843Q8N446 348 aa11.66□□□□□ -0.54
LTBR-201ENST00000228918 DNAJC9-AS1A6NH13 148 aa11.66□□□□□ -0.54
LTBR-201ENST00000228918 LINC00694P0DN24 101 aa11.66□□□□□ -0.54
LTBR-201ENST00000228918 RPL13AP40429 203 aaKnown RBP11.66□□□□□ -0.54
LTBR-201ENST00000228918 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
LTBR-201ENST00000228918 WNK1Q9H4A3 2382 aa11.65□□□□□ -0.54
LTBR-201ENST00000228918 IGLV5-39A0A0G2JS06 123 aa11.65□□□□□ -0.54
LTBR-201ENST00000228918 TRBV10-2A0A0K0K1G8 114 aa11.65□□□□□ -0.54
LTBR-201ENST00000228918 K7EQD1 137 aa11.65□□□□□ -0.54
LTBR-201ENST00000228918 HERVK_113P63121 156 aa11.65□□□□□ -0.54
LTBR-201ENST00000228918 LINC00242Q5T6M2 205 aa11.65□□□□□ -0.54
LTBR-201ENST00000228918 TRBV10-1A0A0K0K1A3 114 aa11.65□□□□□ -0.55
LTBR-201ENST00000228918 A0A1W2PRX2 142 aa11.65□□□□□ -0.55
LTBR-201ENST00000228918 FAM19A3Q7Z5A8 133 aa11.65□□□□□ -0.55
LTBR-201ENST00000228918 C11orf44Q8N8P7 122 aa11.65□□□□□ -0.55
LTBR-201ENST00000228918 RPL36AP83881 106 aaKnown RBP11.64□□□□□ -0.55
LTBR-201ENST00000228918 Q6ZTI0 123 aa11.64□□□□□ -0.55
LTBR-201ENST00000228918 DAND5Q8N907 189 aa11.64□□□□□ -0.55
LTBR-201ENST00000228918 RPL36ALQ969Q0 106 aaKnown RBP11.64□□□□□ -0.55
LTBR-201ENST00000228918 CCL24O00175 119 aa11.63□□□□□ -0.55
LTBR-201ENST00000228918 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
LTBR-201ENST00000228918 CSDC2Q9Y534 153 aaKnown RBP11.63□□□□□ -0.55
LTBR-201ENST00000228918 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
LTBR-201ENST00000228918 SONP18583 2426 aaKnown RBP11.62□□□□□ -0.55
LTBR-201ENST00000228918 COX6CP09669 75 aa11.62□□□□□ -0.55
LTBR-201ENST00000228918 DAZ2Q13117 558 aaKnown RBP11.62□□□□□ -0.55
LTBR-201ENST00000228918 SHISA2Q6UWI4 295 aa11.62□□□□□ -0.55
LTBR-201ENST00000228918 DAZ4Q86SG3 579 aaKnown RBP11.62□□□□□ -0.55
LTBR-201ENST00000228918 DAZ3Q9NR90 486 aaKnown RBP11.62□□□□□ -0.55
LTBR-201ENST00000228918 APCP25054 2843 aa11.62□□□□□ -0.55
LTBR-201ENST00000228918 Q9H8V8 135 aa11.62□□□□□ -0.55
LTBR-201ENST00000228918 TRAV8-4A0A0B4J246 113 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 TEX49A0A1B0GTD5 131 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 NDUFA7O95182 113 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 HERV-K104P63124 156 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 CIRBPQ14011 172 aaKnown RBP11.61□□□□□ -0.55
LTBR-201ENST00000228918 C15orf53Q8NAA6 179 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 ESM1Q9NQ30 184 aa11.61□□□□□ -0.55
LTBR-201ENST00000228918 SMIM20Q8N5G0 67 aa11.6□□□□□ -0.55
LTBR-201ENST00000228918 H7C423 109 aa11.6□□□□□ -0.55
LTBR-201ENST00000228918 LST1O00453 97 aa11.6□□□□□ -0.55
LTBR-201ENST00000228918 LINC00308Q8TCZ7 52 aa11.6□□□□□ -0.55
LTBR-201ENST00000228918 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
LTBR-201ENST00000228918 TRAV13-1A0A0B4J241 112 aa11.59□□□□□ -0.55
LTBR-201ENST00000228918 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
LTBR-201ENST00000228918 CDC42SE2Q9NRR3 84 aa11.59□□□□□ -0.55
LTBR-201ENST00000228918 H3BT86 120 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 195.6 ms