RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 Q6ZSN1 163 aa10.9□□□□□ -0.66
UBE2D4-201ENST00000222402 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.66
UBE2D4-201ENST00000222402 NTN5Q8WTR8 489 aaPredicted RBP10.9□□□□□ -0.66
UBE2D4-201ENST00000222402 SNCGO76070 127 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 ODF3L2Q3SX64 289 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 TMEM86BQ8N661 226 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 VSIG2Q96IQ7 327 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 C11orf68Q9H3H3 251 aaKnown RBP10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 Q9UF83 564 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 ITPR1Q14643 2758 aa10.9□□□□□ -0.67
UBE2D4-201ENST00000222402 CRYBG3Q68DQ2 2970 aa10.89□□□□□ -0.67
UBE2D4-201ENST00000222402 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
UBE2D4-201ENST00000222402 LINC00158P58513 81 aa10.89□□□□□ -0.67
UBE2D4-201ENST00000222402 TINCRA0A1B0GVN0 87 aa10.89□□□□□ -0.67
UBE2D4-201ENST00000222402 ANKRD29Q8N6D5 301 aa10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 WFDC10AQ9H1F0 79 aa10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 BSNQ9UPA5 3926 aa10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 IGHV3-33P01772 117 aa10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 TMEM263Q8WUH6 116 aaKnown RBP10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 UBE2D4Q9Y2X8 147 aa10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 TEX15Q9BXT5 2789 aa10.88□□□□□ -0.67
UBE2D4-201ENST00000222402 FASNP49327 2511 aaKnown RBP10.87□□□□□ -0.67
UBE2D4-201ENST00000222402 TRAV8-4A0A0B4J246 113 aa10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 RS1O15537 224 aa10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 DAZ2Q13117 558 aaKnown RBP10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 DAZ4Q86SG3 579 aaKnown RBP10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 DAZ3Q9NR90 486 aaKnown RBP10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 LINC01620Q4KN68 170 aa10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 HTN3P15516 51 aa10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 CRYBA4P53673 196 aa10.86□□□□□ -0.67
UBE2D4-201ENST00000222402 A0A0B4J2C4 111 aa10.85□□□□□ -0.67
UBE2D4-201ENST00000222402 ICOSQ9Y6W8 199 aa10.85□□□□□ -0.67
UBE2D4-201ENST00000222402 ITPR3Q14573 2671 aa10.85□□□□□ -0.67
UBE2D4-201ENST00000222402 DNAL4O96015 105 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 MIAQ16674 131 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 C16orf74Q96GX8 76 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 A0A096LNT2 108 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 A0A096LPF7 62 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 TRBV10-1A0A0K0K1A3 114 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 CKS1BP61024 79 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 UBE2WQ96B02 151 aa10.84□□□□□ -0.67
UBE2D4-201ENST00000222402 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 UTP20O75691 2785 aaKnown RBP10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 IFITM1P13164 125 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 CLEC2BQ92478 149 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 AMELXQ99217 191 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 CRPP02741 224 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 PFN2P35080 140 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 C1orf158Q8N1D5 194 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 CARD19Q96LW7 228 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 CELSR1Q9NYQ6 3014 aa10.83□□□□□ -0.68
UBE2D4-201ENST00000222402 C6orf226Q5I0X4 101 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 ATP6V0E2Q8NHE4 81 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 CHD6Q8TD26 2715 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 NDUFA7O95182 113 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 J3QKU1 62 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 FSHBP01225 129 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 UBE2D3P61077 147 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 UBE2D2P62837 147 aa10.82□□□□□ -0.68
UBE2D4-201ENST00000222402 PAX4O43316 350 aa10.81□□□□□ -0.68
UBE2D4-201ENST00000222402 PIK3CD-AS1Q5SR53 167 aa10.81□□□□□ -0.68
UBE2D4-201ENST00000222402 TRIAP1O43715 76 aa10.81□□□□□ -0.68
UBE2D4-201ENST00000222402 C5orf38Q86SI9 138 aa10.81□□□□□ -0.68
UBE2D4-201ENST00000222402 CLPSL2Q6UWE3 100 aa10.8□□□□□ -0.68
UBE2D4-201ENST00000222402 GAGE2BQ13066 116 aa10.8□□□□□ -0.68
UBE2D4-201ENST00000222402 GAGE2EQ4V326 116 aa10.8□□□□□ -0.68
UBE2D4-201ENST00000222402 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
UBE2D4-201ENST00000222402 GAGE2DQ9UEU5 116 aa10.8□□□□□ -0.68
UBE2D4-201ENST00000222402 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
UBE2D4-201ENST00000222402 Q8N2B8 174 aa10.79□□□□□ -0.68
UBE2D4-201ENST00000222402 LOC100131303A0A0U1RQF7 123 aa10.79□□□□□ -0.68
UBE2D4-201ENST00000222402 ADAMTSL4-AS1Q5T5F5 129 aa10.79□□□□□ -0.68
UBE2D4-201ENST00000222402 LINC00694P0DN24 101 aa10.78□□□□□ -0.68
UBE2D4-201ENST00000222402 TIRAPP58753 221 aa10.78□□□□□ -0.68
UBE2D4-201ENST00000222402 ANAPC13Q9BS18 74 aa10.78□□□□□ -0.68
UBE2D4-201ENST00000222402 BEAN1Q3B7T3 259 aa10.78□□□□□ -0.68
UBE2D4-201ENST00000222402 ESM1Q9NQ30 184 aa10.78□□□□□ -0.68
UBE2D4-201ENST00000222402 TRBV10-2A0A0K0K1G8 114 aa10.77□□□□□ -0.69
UBE2D4-201ENST00000222402 XCL1P47992 114 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 HECTD1Q9ULT8 2610 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 CRLF1O75462 422 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 GYPEP15421 78 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 COX6A2Q02221 97 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 NDUFA1O15239 70 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 LINC00242Q5T6M2 205 aa10.76□□□□□ -0.69
UBE2D4-201ENST00000222402 MT-ATP8P03928 68 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 HERV-K104P63124 156 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 SS18Q15532 418 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 TEX49A0A1B0GTD5 131 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 MALP21145 153 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 SPANXDQ9BXN6 97 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 SPANXCQ9NY87 97 aa10.75□□□□□ -0.69
UBE2D4-201ENST00000222402 SCGB1A1P11684 91 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms