RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 Q8NAQ8 132 aa10.09□□□□□ -0.79
RTFDC1-201ENST00000023939 VWFP04275 2813 aa10.08□□□□□ -0.8
RTFDC1-201ENST00000023939 IGHV4-28A0A0C4DH34 117 aa10.08□□□□□ -0.8
RTFDC1-201ENST00000023939 LOC100131303A0A0U1RQF7 123 aa10.08□□□□□ -0.8
RTFDC1-201ENST00000023939 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
RTFDC1-201ENST00000023939 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
RTFDC1-201ENST00000023939 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
RTFDC1-201ENST00000023939 KRTAP10-11P60412 298 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 LEPROTO15243 131 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 UBE2D1P51668 147 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 PRO0255Q9UI72 69 aa10.07□□□□□ -0.8
RTFDC1-201ENST00000023939 A6NDN8 102 aa10.06□□□□□ -0.8
RTFDC1-201ENST00000023939 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
RTFDC1-201ENST00000023939 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
RTFDC1-201ENST00000023939 TIRAPP58753 221 aa10.06□□□□□ -0.8
RTFDC1-201ENST00000023939 COX11Q9Y6N1 276 aa10.06□□□□□ -0.8
RTFDC1-201ENST00000023939 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
RTFDC1-201ENST00000023939 TAX1BP3O14907 124 aa10.05□□□□□ -0.8
RTFDC1-201ENST00000023939 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
RTFDC1-201ENST00000023939 TRBV6-8A0A0A6YYG3 113 aa10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 J3QQQ9 107 aa10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 TSPEAR-AS2P59090 65 aa10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 CEND1Q8N111 149 aa10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
RTFDC1-201ENST00000023939 UBE2L6O14933 153 aa10.03□□□□□ -0.8
RTFDC1-201ENST00000023939 SPART-AS1P0CW21 52 aa10.03□□□□□ -0.8
RTFDC1-201ENST00000023939 LGALS3P17931 250 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-201ENST00000023939 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 GYPEP15421 78 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 DAD1P61803 113 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 KRTAP21-3Q3LHN1 58 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 AMMECR1LQ6DCA0 310 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 ATP6V0E2Q8NHE4 81 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 TMEM101Q96IK0 257 aa10.02□□□□□ -0.8
RTFDC1-201ENST00000023939 IGHV1-58A0A0C4DH39 117 aa10.02□□□□□ -0.81
RTFDC1-201ENST00000023939 H3BRM9 83 aa10.02□□□□□ -0.81
RTFDC1-201ENST00000023939 GCSHP23434 173 aa10.02□□□□□ -0.81
RTFDC1-201ENST00000023939 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-201ENST00000023939 A0A0J9YY99 117 aa10.01□□□□□ -0.81
RTFDC1-201ENST00000023939 DEFB4AO15263 64 aa10.01□□□□□ -0.81
RTFDC1-201ENST00000023939 PAX4O43316 350 aa10.01□□□□□ -0.81
RTFDC1-201ENST00000023939 FXYD2P54710 66 aa10.01□□□□□ -0.81
RTFDC1-201ENST00000023939 HERVK_113P63121 156 aa10.01□□□□□ -0.81
RTFDC1-201ENST00000023939 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
RTFDC1-201ENST00000023939 ATP5G1P05496 136 aa10□□□□□ -0.81
RTFDC1-201ENST00000023939 IGHV3-30-3P0DP02 117 aa10□□□□□ -0.81
RTFDC1-201ENST00000023939 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
RTFDC1-201ENST00000023939 HIST1H4GQ99525 98 aa10□□□□□ -0.81
RTFDC1-201ENST00000023939 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
RTFDC1-201ENST00000023939 CELA1Q9UNI1 258 aa10□□□□□ -0.81
RTFDC1-201ENST00000023939 Q6ZVH6 145 aa9.99□□□□□ -0.81
RTFDC1-201ENST00000023939 VSIG2Q96IQ7 327 aa9.99□□□□□ -0.81
RTFDC1-201ENST00000023939 TRAV26-1A0A087WT03 109 aa9.99□□□□□ -0.81
RTFDC1-201ENST00000023939 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
RTFDC1-201ENST00000023939 CDKN2A-AS1Q9UH64 79 aa9.98□□□□□ -0.81
RTFDC1-201ENST00000023939 A0A1B0GWB2 263 aa9.97□□□□□ -0.81
RTFDC1-201ENST00000023939 SMIM13P0DJ93 91 aa9.97□□□□□ -0.81
RTFDC1-201ENST00000023939 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
RTFDC1-201ENST00000023939 GAGE6Q13070 117 aa9.97□□□□□ -0.81
RTFDC1-201ENST00000023939 CHCHD5Q9BSY4 110 aa9.97□□□□□ -0.81
RTFDC1-201ENST00000023939 IGLV5-39A0A0G2JS06 123 aa9.96□□□□□ -0.81
RTFDC1-201ENST00000023939 C9orf118A6NHY6 69 aa9.96□□□□□ -0.81
RTFDC1-201ENST00000023939 K7EP13 123 aa9.96□□□□□ -0.81
RTFDC1-201ENST00000023939 COX6A2Q02221 97 aa9.96□□□□□ -0.81
RTFDC1-201ENST00000023939 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
RTFDC1-201ENST00000023939 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
RTFDC1-201ENST00000023939 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
RTFDC1-201ENST00000023939 G3V4G9 280 aa9.96□□□□□ -0.82
RTFDC1-201ENST00000023939 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 SPINK8P0C7L1 97 aa9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 SRSF9Q13242 221 aaKnown RBP eCLIP9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 ZFAND6Q6FIF0 208 aa9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 SH2D6Q7Z4S9 175 aa9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 C10orf126Q8N4M7 172 aa9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 C11orf68Q9H3H3 251 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 FBN1P35555 2871 aaKnown RBP9.95□□□□□ -0.82
RTFDC1-201ENST00000023939 IGLV4-60A0A075B6I1 120 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 A0A0J9YXY3 114 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 F5H768 121 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 NHP2Q9NX24 153 aaKnown RBP9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 NDUFA12Q9UI09 145 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 TMEM238LA0A1B0GVL6 79 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 A6NJY4 79 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 IGHV3-30P01768 117 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 IGHV3-30-5P0DP03 117 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 UBE2V1Q13404 147 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
RTFDC1-201ENST00000023939 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
RTFDC1-201ENST00000023939 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
RTFDC1-201ENST00000023939 VAMP3Q15836 100 aa9.92□□□□□ -0.82
RTFDC1-201ENST00000023939 H3BNG1 76 aa9.91□□□□□ -0.82
RTFDC1-201ENST00000023939 NDUFA1O15239 70 aa9.91□□□□□ -0.82
RTFDC1-201ENST00000023939 RETNQ9HD89 108 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms