RNA–Protein interactions for RNA: tF(GAA)G

tF(GAA)G, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)G, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)GtF(GAA)G GPM2Q12008 311 aa0.84□□□□□ -2.27
tF(GAA)GtF(GAA)G CLF1Q12309 687 aaPredicted RBP0.84□□□□□ -2.27
tF(GAA)GtF(GAA)G ARP6Q12509 438 aa0.84□□□□□ -2.27
tF(GAA)GtF(GAA)G ZPS1Q12512 249 aa0.84□□□□□ -2.27
tF(GAA)GtF(GAA)G HAA1Q12753 694 aaKnown RBP0.84□□□□□ -2.27
tF(GAA)GtF(GAA)G CYR1P08678 2026 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G TUB3P09734 445 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G MPH2P0CD99 609 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RPS6AP0CX37 236 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RPS6BP0CX38 236 aaPredicted RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G DAL5P15365 543 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G SAC7P17121 654 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G HOP1P20050 605 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G MAK32P23060 363 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G MRPL32P25348 183 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RNQ1P25367 405 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G IMG1P25626 169 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G BUD14P27637 709 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G PET309P32522 965 aaPredicted RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RPD3P32561 433 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G ARA1P38115 344 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G SUL1P38359 859 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G YHL008CP38750 627 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G PAN5P38787 379 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G SPC97P38863 823 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RRP8P38961 392 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G DHH1P39517 506 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G YAL037WP39728 267 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G EXO1P39875 702 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G PSY2P40164 858 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G GAT2P40209 560 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G SAP185P40856 1058 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G YFL054CP43549 646 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G EPL1P43572 832 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G NMD5P46970 1048 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G TRM9P49957 279 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G LYS5P50113 272 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G NBP35P52920 328 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G HOL1P53389 586 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G TEX1P53851 422 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G NOP13P53883 403 aaKnown RBP RIP-Chip data0.83□□□□□ -2.28not detected
tF(GAA)GtF(GAA)G IBD2P53892 351 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G ROD1Q02805 837 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RNY1Q02933 434 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G OYE2Q03558 400 aaKnown RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G RRN11Q04712 507 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G ECM22Q05958 814 aaPredicted RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G ECM7Q06200 448 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G YDL073WQ07454 984 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G TMC1Q08422 150 aaPredicted RBP0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G OXR1Q08952 273 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G SAM3Q08986 587 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G GNT1Q12096 491 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G NCR1Q12200 1170 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G TPO4Q12256 659 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G YLR122CQ12312 125 aa0.83□□□□□ -2.28
tF(GAA)GtF(GAA)G COX1P00401 534 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G AMD1P15274 810 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G ATE1P16639 503 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G ESS1P22696 170 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YCK1P23291 538 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G SNT1P25357 1226 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G GEX1P25596 615 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G GSY2P27472 705 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G PRR1P28708 518 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G CYS4P32582 507 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G DSS4P32601 143 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G SFA1P32771 386 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G CDC13P32797 924 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G TYE7P33122 291 aaPredicted RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G HSP78P33416 811 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G TRM2P33753 639 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G PMT1P33775 817 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G EMC3P36039 253 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G GEX2P36173 615 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G TBS1P38114 1094 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G PSY4P38193 441 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G ECM13P38195 257 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G MMS4P38257 691 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YGP1P38616 354 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G SIP3P38717 1229 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G CTM1P38818 585 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G FMP52P40008 231 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YMR144WP40214 342 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YIL086CP40503 102 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G BUD6P41697 788 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G ZIM17P42844 174 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G CHA4P43634 648 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G GYP7P48365 746 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G TOM22P49334 152 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G CUL3P53202 744 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YGR122WP53272 402 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YNL146WP53906 100 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G UBX4P54730 416 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G RPT6Q01939 405 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G GIP3Q03016 1276 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G YDR209CQ03480 137 aa0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G SNU56Q03782 492 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G TSR1Q07381 788 aaKnown RBP0.82□□□□□ -2.28
tF(GAA)GtF(GAA)G ATG10Q07879 167 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms