RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C RPP0P05317 312 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C ERG20P08524 352 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C RPS17BP14127 136 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C CDC26P14724 124 aa4.03□□□□□ -1.76
RPA43YOR340C ERG6P25087 383 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C HXT4P32467 576 aa4.03□□□□□ -1.76
RPA43YOR340C PRS1P32895 427 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C SPL2P38839 148 aa4.03□□□□□ -1.76
RPA43YOR340C RRP8P38961 392 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C LYS9P38999 446 aa4.03□□□□□ -1.76
RPA43YOR340C NUP60P39705 539 aa4.03□□□□□ -1.76
RPA43YOR340C FMP52P40008 231 aa4.03□□□□□ -1.76
RPA43YOR340C YNL195CP40168 261 aa4.03□□□□□ -1.76
RPA43YOR340C TAN1P53072 289 aaPredicted RBP4.03□□□□□ -1.76
RPA43YOR340C CSI1Q04368 295 aa4.03□□□□□ -1.76
RPA43YOR340C YPS7Q06325 596 aa4.03□□□□□ -1.76
RPA43YOR340C DIA2Q08496 732 aaPredicted RBP4.03□□□□□ -1.76
RPA43YOR340C RRP6Q12149 733 aaKnown RBP4.03□□□□□ -1.76
RPA43YOR340C TRX2P22803 104 aaKnown RBP4.02□□□□□ -1.77
RPA43YOR340C OAR1P35731 278 aa4.02□□□□□ -1.77
RPA43YOR340C YHL017WP38745 532 aa4.02□□□□□ -1.77
RPA43YOR340C SHC1P39000 512 aa4.02□□□□□ -1.77
RPA43YOR340C DUN1P39009 513 aa4.02□□□□□ -1.77
RPA43YOR340C FUN12P39730 1002 aaKnown RBP4.02□□□□□ -1.77
RPA43YOR340C GET2P40056 285 aa4.02□□□□□ -1.77
RPA43YOR340C IES5P40060 125 aa4.02□□□□□ -1.77
RPA43YOR340C YIL092WP40497 633 aa4.02□□□□□ -1.77
RPA43YOR340C IES1P43579 692 aa4.02□□□□□ -1.77
RPA43YOR340C NOP9P47077 666 aaKnown RBP4.02□□□□□ -1.77
RPA43YOR340C HOL1P53389 586 aa4.02□□□□□ -1.77
RPA43YOR340C CNM67P53865 581 aaKnown RBP4.02□□□□□ -1.77
RPA43YOR340C MUK1Q02866 612 aa4.02□□□□□ -1.77
RPA43YOR340C HBT1Q07653 1046 aaKnown RBP4.02□□□□□ -1.77
RPA43YOR340C VHS3Q08438 674 aa4.02□□□□□ -1.77
RPA43YOR340C FLO11P08640 1367 aa4.02□□□□□ -1.77
RPA43YOR340C YLR278CQ05854 1341 aa4.01□□□□□ -1.77
RPA43YOR340C DAL5P15365 543 aa4.01□□□□□ -1.77
RPA43YOR340C SEC15P22224 910 aa4.01□□□□□ -1.77
RPA43YOR340C KRE2P27809 442 aa4.01□□□□□ -1.77
RPA43YOR340C MGM1P32266 881 aa4.01□□□□□ -1.77
RPA43YOR340C PET127P32606 800 aa4.01□□□□□ -1.77
RPA43YOR340C MOH1P38191 138 aa4.01□□□□□ -1.77
RPA43YOR340C PCL5P38794 229 aa4.01□□□□□ -1.77
RPA43YOR340C SFB3P38810 929 aa4.01□□□□□ -1.77
RPA43YOR340C EAF5P39995 279 aa4.01□□□□□ -1.77
RPA43YOR340C HIS6P40545 261 aa4.01□□□□□ -1.77
RPA43YOR340C STB4P50104 949 aa4.01□□□□□ -1.77
RPA43YOR340C PAN2P53010 1115 aaPredicted RBP4.01□□□□□ -1.77
RPA43YOR340C TEL2P53038 688 aa4.01□□□□□ -1.77
RPA43YOR340C RPT4P53549 437 aaKnown RBP4.01□□□□□ -1.77
RPA43YOR340C ECM16Q04217 1267 aaKnown RBP4.01□□□□□ -1.77
RPA43YOR340C CDC45Q08032 650 aa4.01□□□□□ -1.77
RPA43YOR340C NGL1Q08213 363 aaKnown RBP4.01□□□□□ -1.77
RPA43YOR340C MCH5Q08777 521 aa4.01□□□□□ -1.77
RPA43YOR340C CWC2Q12046 339 aaPredicted RBP4.01□□□□□ -1.77
RPA43YOR340C NUR1Q12066 484 aa4.01□□□□□ -1.77
RPA43YOR340C GRX6Q12438 231 aa4.01□□□□□ -1.77
RPA43YOR340C YKL033W-AQ86ZR7 236 aa4.01□□□□□ -1.77
RPA43YOR340C SAC3P46674 1301 aa4□□□□□ -1.77
RPA43YOR340C FRS1P15624 595 aaKnown RBP4□□□□□ -1.77
RPA43YOR340C PEX1P24004 1043 aa4□□□□□ -1.77
RPA43YOR340C UBA2P52488 636 aa4□□□□□ -1.77
RPA43YOR340C YGR021WP53212 290 aa4□□□□□ -1.77
RPA43YOR340C YAP1802P53309 568 aa4□□□□□ -1.77
RPA43YOR340C SSL2Q00578 843 aa4□□□□□ -1.77
RPA43YOR340C CEG1Q01159 459 aaPredicted RBP4□□□□□ -1.77
RPA43YOR340C MTD1Q02046 320 aaKnown RBP4□□□□□ -1.77
RPA43YOR340C YML122CQ03207 126 aa4□□□□□ -1.77
RPA43YOR340C RCR2Q03446 210 aaKnown RBP4□□□□□ -1.77
RPA43YOR340C VBA4Q04602 768 aaKnown RBP4□□□□□ -1.77
RPA43YOR340C STP4Q07351 490 aa4□□□□□ -1.77
RPA43YOR340C THI3Q07471 609 aa4□□□□□ -1.77
RPA43YOR340C CLF1Q12309 687 aaPredicted RBP4□□□□□ -1.77
RPA43YOR340C RPS9BP05755 195 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C RPS19AP07280 144 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C RPS19BP07281 144 aaPredicted RBP3.99□□□□□ -1.77
RPA43YOR340C APA1P16550 321 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C IME1P21190 360 aa3.99□□□□□ -1.77
RPA43YOR340C PHO3P24031 467 aa3.99□□□□□ -1.77
RPA43YOR340C LCB1P25045 558 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C DGR2P32330 852 aa3.99□□□□□ -1.77
RPA43YOR340C MRS6P32864 603 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C STV1P37296 890 aa3.99□□□□□ -1.77
RPA43YOR340C CBR1P38626 284 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C YHL041WP38730 149 aa3.99□□□□□ -1.77
RPA43YOR340C HRB1P38922 454 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
RPA43YOR340C PIG2P40187 538 aa3.99□□□□□ -1.77
RPA43YOR340C GSM1P42950 618 aa3.99□□□□□ -1.77
RPA43YOR340C QRI7P43122 407 aa3.99□□□□□ -1.77
RPA43YOR340C IRC5P43610 853 aa3.99□□□□□ -1.77
RPA43YOR340C ENP2P48234 707 aaKnown RBP3.99□□□□□ -1.77
RPA43YOR340C VPS36Q06696 566 aa3.99□□□□□ -1.77
RPA43YOR340C PSF3Q12146 194 aa3.99□□□□□ -1.77
RPA43YOR340C YOL114CQ12322 202 aa3.99□□□□□ -1.77
RPA43YOR340C ZRT2Q12436 422 aa3.99□□□□□ -1.77
RPA43YOR340C POM34Q12445 299 aa3.99□□□□□ -1.77
RPA43YOR340C SIR3P06701 978 aa3.98□□□□□ -1.77
RPA43YOR340C MSS18P08593 268 aa3.98□□□□□ -1.77
RPA43YOR340C YEL076C-AP0CX16 216 aa3.98□□□□□ -1.77
RPA43YOR340C YLR464WP0CX17 216 aa3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms