RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	NIC96	P34077	839 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	TYS1	P36421	394 aa	Known RBP	7.49	□□□□□ -1.21
AFG2	YLR397C	CCZ1	P38273	704 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	COS111	P38308	924 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	ERP2	P39704	215 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	SER33	P40510	469 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	YGR210C	P42942	411 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	DID2	P69771	204 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	SED5	Q01590	340 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	MDM1	Q01846	1127 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	SVL3	Q03088	825 aa	Known RBP	7.49	□□□□□ -1.21
AFG2	YLR397C	YDR476C	Q03362	224 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	TRM8	Q12009	286 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	DAS2	Q12084	232 aa		7.49	□□□□□ -1.21
AFG2	YLR397C	VMR1	P38735	1592 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	ALG3	P38179	458 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	ALG14	P38242	237 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	BSD2	P38356	321 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	VFA1	P40080	203 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	TED1	P40533	473 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	YAP5	P40574	245 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	VMA10	P48836	114 aa	Known RBP	7.48	□□□□□ -1.21
AFG2	YLR397C	CGR1	P53188	120 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	TFB3	Q03290	321 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	BNA7	Q04066	261 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	UBX5	Q06682	500 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	SUB2	Q07478	446 aa	Known RBP	7.48	□□□□□ -1.21
AFG2	YLR397C	DIA2	Q08496	732 aa	Predicted RBP	7.48	□□□□□ -1.21
AFG2	YLR397C	YOR131C	Q12486	218 aa		7.48	□□□□□ -1.21
AFG2	YLR397C	GAL1	P04385	528 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	ATR1	P13090	542 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	DBP5	P20449	482 aa	Known RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	SPO11	P23179	398 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	HXT2	P23585	541 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	FBP26	P32604	452 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	AGE2	P40529	298 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	ELP2	P42935	788 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	ROG3	P43602	733 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	YKE2	P52553	114 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	MNT4	P53745	580 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	HXT15	P54854	567 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	MRPL13	Q02204	264 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	RMI1	Q02685	241 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	SKI8	Q02793	397 aa	Predicted RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	CRR1	Q05790	422 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	YLR407W	Q06070	228 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	OXR1	Q08952	273 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	MED2	Q12124	431 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	GSY1	P23337	708 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	CIN8	P27895	1000 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	ICL1	P28240	557 aa	Predicted RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	LYP1	P32487	611 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	RTG2	P32608	588 aa	Known RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	YKL077W	P36081	392 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	ANR2	P36090	516 aa	Predicted RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	KTR3	P38130	404 aa	Predicted RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	GLO3	P38682	493 aa	Known RBP	7.47	□□□□□ -1.21
AFG2	YLR397C	YFR018C	P43599	363 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	YDL114W	Q07530	308 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	GTT2	Q12390	233 aa		7.47	□□□□□ -1.21
AFG2	YLR397C	ADE5,7	P07244	802 aa	Known RBP	7.46	□□□□□ -1.21
AFG2	YLR397C	MATALPHA2	P0CY08	210 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	HMLALPHA2	P0CY09	210 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	PGI1	P12709	554 aa	Known RBP	7.46	□□□□□ -1.21
AFG2	YLR397C	IMP2'	P32351	346 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	MRT4	P33201	236 aa	Known RBP	7.46	□□□□□ -1.21
AFG2	YLR397C	GRX7	P38068	203 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	MSR1	P38714	643 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	SPO22	P40511	975 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	NUP42	P49686	430 aa	Known RBP	7.46	□□□□□ -1.21
AFG2	YLR397C	CAF120	P53836	1060 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	ALO1	P54783	526 aa	Known RBP	7.46	□□□□□ -1.21
AFG2	YLR397C	ACS1	Q01574	713 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	RAD30	Q04049	632 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	CDA1	Q06702	301 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	NDE2	Q07500	545 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	PSR2	Q07949	397 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	YPL191C	Q08930	360 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	YPT6	Q99260	215 aa		7.46	□□□□□ -1.21
AFG2	YLR397C	RSF2	P46974	1380 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	HIS4	P00815	799 aa	Known RBP	7.46	□□□□□ -1.22
AFG2	YLR397C	PHO4	P07270	312 aa	Known RBP	7.46	□□□□□ -1.22
AFG2	YLR397C	RAP1	P11938	827 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	MRP13	P12686	339 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	DGR2	P32330	852 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	FRD1	P32614	470 aa	Known RBP	7.46	□□□□□ -1.22
AFG2	YLR397C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.46	□□□□□ -1.22	not detected
AFG2	YLR397C	MAM33	P40513	266 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	FMP32	P43557	207 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	TAD1	P53065	400 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	MRPL50	P53724	139 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	ADE16	P54113	591 aa	Known RBP	7.46	□□□□□ -1.22
AFG2	YLR397C	YEH1	Q07804	573 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	VHS3	Q08438	674 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	MAM3	Q12296	706 aa		7.46	□□□□□ -1.22
AFG2	YLR397C	PRI1	P10363	409 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	HMG2	P12684	1045 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	KTR4	P38131	464 aa		7.45	□□□□□ -1.22
AFG2	YLR397C	ALD6	P54115	500 aa	Known RBP	7.45	□□□□□ -1.22
AFG2	YLR397C	ASA1	Q06822	443 aa		7.45	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms