RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC42	YLR229C	GIR2	Q03768	265 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42	YLR229C	SFH1	Q06168	426 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	CUR1	Q06469	252 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	YPR196W	Q06595	470 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	YPR078C	Q06813	372 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	SDH5	Q08230	162 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	YOR352W	Q08816	343 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	ZRT2	Q12436	422 aa		4.63	□□□□□ -1.67
CDC42	YLR229C	SWI6	P09959	803 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	GCD2	P12754	651 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	SAM35	P14693	329 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	TUP1	P16649	713 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	DBP2	P24783	546 aa	Known RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	RAD51	P25454	400 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	PDB1	P32473	366 aa	Known RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	YME2	P32843	850 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	DOM34	P33309	386 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	SLA2	P33338	968 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	MCR1	P36060	302 aa	Known RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	RPC37	P36121	282 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	LAS1	P36146	502 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	JNM1	P36224	373 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	YBR284W	P38150	797 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	UBP13	P38187	747 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
CDC42	YLR229C	VAB2	P40003	282 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	PEA2	P40091	420 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	YIL001W	P40560	513 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	CCT8	P47079	568 aa	Known RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	COS5	P47187	383 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	ZPR1	P53303	486 aa	Known RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	PTA1	Q01329	785 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	SOV1	Q04748	898 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	ABP140	Q08641	628 aa	Known RBP	4.62	□□□□□ -1.67
CDC42	YLR229C	SVS1	Q12254	260 aa		4.62	□□□□□ -1.67
CDC42	YLR229C	TCP1	P12612	559 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	KIN2	P13186	1147 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	TAL1	P15019	335 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	SNF5	P18480	905 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	ARG1	P22768	420 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	GCG1	P32656	232 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	YEL1	P34225	687 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	SIT1	P39980	628 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	SDS3	P40505	327 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	LSB3	P43603	459 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	SET2	P46995	733 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	TAD1	P53065	400 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	ALG12	P53730	551 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	YNL144C	P53907	740 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	ARK1	P53974	638 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	ADA2	Q02336	434 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	SSY1	Q03770	852 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	YMR114C	Q04471	368 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	UTP14	Q04500	899 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	YLR297W	Q05899	129 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	CSR1	Q06705	408 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	TSR1	Q07381	788 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	CRD1	Q07560	283 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	ISA1	Q07821	250 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	YLR001C	Q07895	862 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	RLP24	Q07915	199 aa	Known RBP	4.61	□□□□□ -1.67
CDC42	YLR229C	YLL058W	Q12198	575 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	OSW2	Q12202	724 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	SEY1	Q99287	776 aa		4.61	□□□□□ -1.67
CDC42	YLR229C	BI4	P03879	638 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	VMA2	P16140	517 aa	Known RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	CDC12	P32468	407 aa	Known RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	NIP1	P32497	812 aa	Known RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	UTR4	P32626	227 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	YSC83	P32792	385 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	LIP5	P32875	414 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	SHP1	P34223	423 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	ATG19	P35193	415 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	OAF3	P36023	863 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	FZO1	P38297	855 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	SET5	P38890	526 aa	Known RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	SAK1	P38990	1142 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	PEX7	P39108	375 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	KAP123	P40069	1113 aa	Known RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	LCB2	P40970	561 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	NIT3	P49954	291 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	RRT6	P53117	311 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	YGL039W	P53183	348 aa	Known RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
CDC42	YLR229C	RSM24	Q03976	319 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	MLH2	Q07980	695 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	RCL1	Q08096	367 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC42	YLR229C	YPR071W	Q12346	211 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	HBN1	Q96VH4	193 aa		4.6	□□□□□ -1.67
CDC42	YLR229C	ADH4	P10127	382 aa		4.59	□□□□□ -1.67
CDC42	YLR229C	GFA1	P14742	717 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	ILV6	P25605	309 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	YCR051W	P25631	222 aa		4.59	□□□□□ -1.67
CDC42	YLR229C	CDC48	P25694	835 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	RPL5	P26321	297 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	PAP1	P29468	568 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	DPH5	P32469	300 aa	Predicted RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	SSE1	P32589	693 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	HBS1	P32769	611 aa	Known RBP	4.59	□□□□□ -1.67
CDC42	YLR229C	YME1	P32795	747 aa		4.59	□□□□□ -1.67

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