RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C NIT3P49954 291 aa5.61□□□□□ -1.51
VPS1YKR001C YNL115CP53925 644 aa5.61□□□□□ -1.51
VPS1YKR001C SFB2P53953 876 aa5.61□□□□□ -1.51
VPS1YKR001C UBX4P54730 416 aa5.61□□□□□ -1.51
VPS1YKR001C ALO1P54783 526 aaKnown RBP5.61□□□□□ -1.51
VPS1YKR001C SLT2Q00772 484 aa5.61□□□□□ -1.51
VPS1YKR001C YPD1Q07688 167 aa5.61□□□□□ -1.51
VPS1YKR001C NTG2Q08214 380 aa5.61□□□□□ -1.51
VPS1YKR001C DAS2Q12084 232 aa5.61□□□□□ -1.51
VPS1YKR001C YBL113CQ7M4S9 792 aa5.61□□□□□ -1.51
VPS1YKR001C FKS1P38631 1876 aaKnown RBP5.61□□□□□ -1.51
VPS1YKR001C SIR3P06701 978 aa5.6□□□□□ -1.51
VPS1YKR001C RAP1P11938 827 aa5.6□□□□□ -1.51
VPS1YKR001C SPO16P17122 198 aa5.6□□□□□ -1.51
VPS1YKR001C YPK2P18961 677 aa5.6□□□□□ -1.51
VPS1YKR001C TKL1P23254 680 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C CAD1P24813 409 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C CLB4P24871 460 aa5.6□□□□□ -1.51
VPS1YKR001C GUT2P32191 649 aa5.6□□□□□ -1.51
VPS1YKR001C CDC12P32468 407 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C BCH2P36122 765 aa5.6□□□□□ -1.51
VPS1YKR001C VMA22P38784 181 aa5.6□□□□□ -1.51
VPS1YKR001C YJR039WP47107 1121 aa5.6□□□□□ -1.51
VPS1YKR001C RPN9Q04062 393 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C RTT103Q05543 409 aa5.6□□□□□ -1.51
VPS1YKR001C YPQ2Q06328 317 aa5.6□□□□□ -1.51
VPS1YKR001C RIF1P29539 1916 aa5.6□□□□□ -1.51
VPS1YKR001C FAB1P34756 2278 aa5.6□□□□□ -1.51
VPS1YKR001C BI4P03879 638 aa5.6□□□□□ -1.51
VPS1YKR001C HXK1P04806 485 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C SNF1P06782 633 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C PBY1P38254 753 aa5.6□□□□□ -1.51
VPS1YKR001C AMN1P38285 549 aaPredicted RBP5.6□□□□□ -1.51
VPS1YKR001C CBR1P38626 284 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C CIT3P43635 486 aa5.6□□□□□ -1.51
VPS1YKR001C ENT3P47160 408 aa5.6□□□□□ -1.51
VPS1YKR001C GCV2P49095 1034 aa5.6□□□□□ -1.51
VPS1YKR001C YML6P51998 286 aa5.6□□□□□ -1.51
VPS1YKR001C TEL2P53038 688 aa5.6□□□□□ -1.51
VPS1YKR001C YKR005CQ02203 525 aa5.6□□□□□ -1.51
VPS1YKR001C GUD1Q07729 489 aa5.6□□□□□ -1.51
VPS1YKR001C CUE5Q08412 411 aaKnown RBP5.6□□□□□ -1.51
VPS1YKR001C SGO1Q08490 590 aa5.6□□□□□ -1.51
VPS1YKR001C FMP40Q08968 688 aaPredicted RBP5.6□□□□□ -1.51
VPS1YKR001C PIN2Q12057 282 aa5.6□□□□□ -1.51
VPS1YKR001C SPO21Q12411 609 aa5.6□□□□□ -1.51
VPS1YKR001C TOR1P35169 2470 aa5.59□□□□□ -1.51
VPS1YKR001C MIS1P09440 975 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C PRP28P23394 588 aa5.59□□□□□ -1.51
VPS1YKR001C HSP30P25619 332 aa5.59□□□□□ -1.51
VPS1YKR001C VMA6P32366 345 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C GDA1P32621 518 aa5.59□□□□□ -1.51
VPS1YKR001C NPL6P32832 435 aa5.59□□□□□ -1.51
VPS1YKR001C PMT1P33775 817 aa5.59□□□□□ -1.51
VPS1YKR001C RDH54P38086 958 aa5.59□□□□□ -1.51
VPS1YKR001C FLR1P38124 548 aa5.59□□□□□ -1.51
VPS1YKR001C REG2P38232 338 aa5.59□□□□□ -1.51
VPS1YKR001C VPS45P38932 577 aa5.59□□□□□ -1.51
VPS1YKR001C SEC31P38968 1273 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C PRM9P39551 298 aa5.59□□□□□ -1.51
VPS1YKR001C RVS167P39743 482 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C YIL077CP40508 320 aa5.59□□□□□ -1.51
VPS1YKR001C RTS2P40962 232 aa5.59□□□□□ -1.51
VPS1YKR001C COX16P47081 118 aa5.59□□□□□ -1.51
VPS1YKR001C HSH155P49955 971 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C AZR1P50080 613 aa5.59□□□□□ -1.51
VPS1YKR001C MNT2P53059 558 aa5.59□□□□□ -1.51
VPS1YKR001C YGL117WP53133 265 aa5.59□□□□□ -1.51
VPS1YKR001C LIF1P53150 421 aa5.59□□□□□ -1.51
VPS1YKR001C KRE33P53914 1056 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C GSF2Q04697 403 aaKnown RBP5.59□□□□□ -1.51
VPS1YKR001C COX20Q04935 205 aa5.59□□□□□ -1.51
VPS1YKR001C FAR8Q05040 523 aa5.59□□□□□ -1.51
VPS1YKR001C PDR8Q06149 701 aa5.59□□□□□ -1.51
VPS1YKR001C YDL109CQ12103 647 aa5.59□□□□□ -1.51
VPS1YKR001C TAH18Q12181 623 aa5.59□□□□□ -1.51
VPS1YKR001C STB3Q12427 513 aa5.59□□□□□ -1.51
VPS1YKR001C MAS2P11914 482 aa5.59□□□□□ -1.52
VPS1YKR001C COQ1P18900 473 aa5.59□□□□□ -1.52
VPS1YKR001C MSB1P21339 1137 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C APL1P27351 700 aa5.59□□□□□ -1.52
VPS1YKR001C EFT1P32324 842 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C HMX1P32339 317 aa5.59□□□□□ -1.52
VPS1YKR001C IMP2'P32351 346 aa5.59□□□□□ -1.52
VPS1YKR001C MEI5P32489 222 aa5.59□□□□□ -1.52
VPS1YKR001C MRS6P32864 603 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C PGM2P37012 569 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C MRX3P38172 270 aa5.59□□□□□ -1.52
VPS1YKR001C FTH1P38310 465 aa5.59□□□□□ -1.52
VPS1YKR001C GPP1P41277 250 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C OYE3P41816 400 aaPredicted RBP5.59□□□□□ -1.52
VPS1YKR001C SPC105P53148 917 aa5.59□□□□□ -1.52
VPS1YKR001C OKP1P53298 406 aa5.59□□□□□ -1.52
VPS1YKR001C ARC35P53731 342 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C KAP120Q02932 1032 aa5.59□□□□□ -1.52
VPS1YKR001C FIN1Q03898 291 aa5.59□□□□□ -1.52
VPS1YKR001C YMR114CQ04471 368 aaKnown RBP5.59□□□□□ -1.52
VPS1YKR001C PIG1Q06216 648 aa5.59□□□□□ -1.52
VPS1YKR001C YFT2Q06676 274 aa5.59□□□□□ -1.52
VPS1YKR001C YCG1Q06680 1035 aa5.59□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms