RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W XRS2P33301 854 aa2.63□□□□□ -1.99
SNU114YKL173W NUP120P35729 1037 aa2.63□□□□□ -1.99
SNU114YKL173W ESL2P36168 1195 aa2.63□□□□□ -1.99
SNU114YKL173W SDS3P40505 327 aa2.63□□□□□ -1.99
SNU114YKL173W VHS3Q08438 674 aa2.63□□□□□ -1.99
SNU114YKL173W PSF3Q12146 194 aa2.63□□□□□ -1.99
SNU114YKL173W VPS5Q92331 675 aa2.63□□□□□ -1.99
SNU114YKL173W HRP1Q99383 534 aaKnown RBP2.63□□□□□ -1.99
SNU114YKL173W SSM4P40318 1319 aa2.63□□□□□ -1.99
SNU114YKL173W QCR6P00127 147 aa2.63□□□□□ -1.99
SNU114YKL173W ADE3P07245 946 aaKnown RBP2.63□□□□□ -1.99
SNU114YKL173W POL3P15436 1097 aa2.63□□□□□ -1.99
SNU114YKL173W SIR1P21691 654 aa2.63□□□□□ -1.99
SNU114YKL173W ARG1P22768 420 aa2.63□□□□□ -1.99
SNU114YKL173W RMA1P36001 430 aaKnown RBP2.63□□□□□ -1.99
SNU114YKL173W YNL195CP40168 261 aa2.63□□□□□ -1.99
SNU114YKL173W SIP4P46954 829 aa2.63□□□□□ -1.99
SNU114YKL173W MRPL13Q02204 264 aa2.63□□□□□ -1.99
SNU114YKL173W RPO21P04050 1733 aaKnown RBP2.62□□□□□ -1.99
SNU114YKL173W PRE4P30657 266 aa2.62□□□□□ -1.99
SNU114YKL173W YEL068CP39977 110 aa2.62□□□□□ -1.99
SNU114YKL173W FMP52P40008 231 aa2.62□□□□□ -1.99
SNU114YKL173W PEF1P53238 335 aa2.62□□□□□ -1.99
SNU114YKL173W HOL1P53389 586 aa2.62□□□□□ -1.99
SNU114YKL173W TSR2Q06672 205 aaKnown RBP2.62□□□□□ -1.99
SNU114YKL173W VPS36Q06696 566 aa2.62□□□□□ -1.99
SNU114YKL173W IRC13Q08630 104 aa2.62□□□□□ -1.99
SNU114YKL173W SUT2Q12286 268 aa2.62□□□□□ -1.99
SNU114YKL173W MET3P08536 511 aa2.62□□□□□ -1.99
SNU114YKL173W CDC16P09798 840 aa2.62□□□□□ -1.99
SNU114YKL173W ERG6P25087 383 aaKnown RBP2.62□□□□□ -1.99
SNU114YKL173W MTH1P35198 433 aa2.62□□□□□ -1.99
SNU114YKL173W NOP4P37838 685 aaKnown RBP2.62□□□□□ -1.99
SNU114YKL173W YHL017WP38745 532 aa2.62□□□□□ -1.99
SNU114YKL173W SAW1P39735 261 aa2.62□□□□□ -1.99
SNU114YKL173W VTC2P43585 828 aa2.62□□□□□ -1.99
SNU114YKL173W MPP10P47083 593 aaKnown RBP2.62□□□□□ -1.99
SNU114YKL173W ACS1Q01574 713 aa2.62□□□□□ -1.99
SNU114YKL173W NRG1Q03125 231 aa2.62□□□□□ -1.99
SNU114YKL173W MCM21Q06675 368 aa2.62□□□□□ -1.99
SNU114YKL173W IWR1Q07532 353 aaPredicted RBP2.62□□□□□ -1.99
SNU114YKL173W PSR1Q07800 427 aa2.62□□□□□ -1.99
SNU114YKL173W SGS1P35187 1447 aa2.62□□□□□ -1.99
SNU114YKL173W GET2P40056 285 aa2.61□□□□□ -1.99
SNU114YKL173W LSM5P40089 93 aaKnown RBP2.61□□□□□ -1.99
SNU114YKL173W RAD26P40352 1085 aa2.61□□□□□ -1.99
SNU114YKL173W POL31P46957 487 aa2.61□□□□□ -1.99
SNU114YKL173W FHN1P53279 174 aa2.61□□□□□ -1.99
SNU114YKL173W SGO1Q08490 590 aa2.61□□□□□ -1.99
SNU114YKL173W PHO5P00635 467 aa2.61□□□□□ -1.99
SNU114YKL173W URA3P03962 267 aa2.61□□□□□ -1.99
SNU114YKL173W RPL19AP0CX82 189 aaKnown RBP2.61□□□□□ -1.99
SNU114YKL173W RPL19BP0CX83 189 aaPredicted RBP2.61□□□□□ -1.99
SNU114YKL173W FMO1P38866 432 aa2.61□□□□□ -1.99
SNU114YKL173W HRB1P38922 454 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SNU114YKL173W NPR2P39923 615 aa2.61□□□□□ -1.99
SNU114YKL173W YMR210WQ03649 449 aa2.61□□□□□ -1.99
SNU114YKL173W SNO4Q04902 237 aa2.61□□□□□ -1.99
SNU114YKL173W ISA1Q07821 250 aaPredicted RBP2.61□□□□□ -1.99
SNU114YKL173W GRC3Q07845 632 aa2.61□□□□□ -1.99
SNU114YKL173W CIR2Q08822 631 aa2.61□□□□□ -1.99
SNU114YKL173W HSP33Q08914 237 aaKnown RBP2.61□□□□□ -1.99
SNU114YKL173W HSP32Q08992 237 aa2.61□□□□□ -1.99
SNU114YKL173W ICL2Q12031 575 aa2.61□□□□□ -1.99
SNU114YKL173W YRF1-2P40105 1681 aa2.61□□□□□ -1.99
SNU114YKL173W GEA2P39993 1459 aaKnown RBP2.61□□□□□ -1.99
SNU114YKL173W SEM1O94742 89 aa2.6□□□□□ -1.99
SNU114YKL173W LEU2P04173 364 aaPredicted RBP2.6□□□□□ -1.99
SNU114YKL173W FRS1P15624 595 aaKnown RBP2.6□□□□□ -1.99
SNU114YKL173W OPI1P21957 404 aa2.6□□□□□ -1.99
SNU114YKL173W CLB4P24871 460 aa2.6□□□□□ -1.99
SNU114YKL173W YBR225WP38321 900 aa2.6□□□□□ -1.99
SNU114YKL173W CRG1P38892 291 aaRIP-Chip data2.6□□□□□ -1.99not detected
SNU114YKL173W MTR3P48240 250 aaPredicted RBP2.6□□□□□ -1.99
SNU114YKL173W PRP31P49704 494 aaPredicted RBP2.6□□□□□ -1.99
SNU114YKL173W MTL1P53214 551 aa2.6□□□□□ -1.99
SNU114YKL173W SMX3P54999 86 aaPredicted RBP2.6□□□□□ -1.99
SNU114YKL173W UTP21Q06078 939 aaPredicted RBP2.6□□□□□ -1.99
SNU114YKL173W IRC10Q08118 586 aa2.6□□□□□ -1.99
SNU114YKL173W TAF3Q12297 353 aa2.6□□□□□ -1.99
SNU114YKL173W NUC1P08466 329 aa2.6□□□□□ -1.99
SNU114YKL173W BET2P20133 325 aa2.6□□□□□ -1.99
SNU114YKL173W OLE1P21147 510 aaKnown RBP2.6□□□□□ -1.99
SNU114YKL173W RAD16P31244 790 aa2.6□□□□□ -1.99
SNU114YKL173W GEX2P36173 615 aa2.6□□□□□ -1.99
SNU114YKL173W YLF2P38746 405 aa2.6□□□□□ -1.99
SNU114YKL173W PSP1P50896 841 aaKnown RBP2.6□□□□□ -1.99
SNU114YKL173W TEL2P53038 688 aa2.6□□□□□ -1.99
SNU114YKL173W RBG2P53295 368 aaKnown RBP2.6□□□□□ -1.99
SNU114YKL173W CBK1P53894 756 aa2.6□□□□□ -1.99
SNU114YKL173W GPD1Q00055 391 aaKnown RBP2.6□□□□□ -1.99
SNU114YKL173W YMR018WQ04364 514 aa2.6□□□□□ -1.99
SNU114YKL173W CSR1Q06705 408 aaKnown RBP2.6□□□□□ -1.99
SNU114YKL173W PSK2Q08217 1101 aa2.6□□□□□ -1.99
SNU114YKL173W SCM3Q12334 223 aa2.6□□□□□ -1.99
SNU114YKL173W ENT1Q12518 454 aa2.6□□□□□ -1.99
SNU114YKL173W BIK1P11709 440 aa2.6□□□□□ -1.99
SNU114YKL173W RIT1P23796 513 aa2.6□□□□□ -1.99
SNU114YKL173W DGR2P32330 852 aa2.6□□□□□ -1.99
SNU114YKL173W SLC1P33333 303 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms