RNA–Protein interactions for RNA: YKL008C

LAC1, Transcript of Ceramide synthase component, yeast

Gene LAC1, Length 1,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LAC1	YKL008C	PIF1	P07271	859 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	YPK1	P12688	680 aa	Known RBP	5.09	□□□□□ -1.59
LAC1	YKL008C	SAT4	P25333	603 aa	Known RBP	5.09	□□□□□ -1.59
LAC1	YKL008C	ADY2	P25613	283 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	RPS7A	P26786	190 aa	Known RBP	5.09	□□□□□ -1.59
LAC1	YKL008C	PRE2	P30656	287 aa	Known RBP	5.09	□□□□□ -1.59
LAC1	YKL008C	LOT5	P34234	306 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	APM3	P38153	483 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	POL31	P46957	487 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	IDS2	P46958	469 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	SAP4	P53036	818 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	YGL117W	P53133	265 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	GIS1	Q03833	894 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	AAD4	Q07747	329 aa		5.09	□□□□□ -1.59
LAC1	YKL008C	BNR1	P40450	1375 aa		5.08	□□□□□ -1.6
LAC1	YKL008C	CPA2	P03965	1118 aa	Known RBP	5.08	□□□□□ -1.6
LAC1	YKL008C	SEC18	P18759	758 aa	Known RBP	5.08	□□□□□ -1.6
LAC1	YKL008C	YMC1	P32331	307 aa		5.08	□□□□□ -1.6
LAC1	YKL008C	YPT10	P38146	199 aa		5.08	□□□□□ -1.6
LAC1	YKL008C	STT3	P39007	718 aa	Known RBP	5.08	□□□□□ -1.6
LAC1	YKL008C	COQ6	P53318	479 aa		5.08	□□□□□ -1.6
LAC1	YKL008C	CPR8	P53728	308 aa		5.08	□□□□□ -1.6
LAC1	YKL008C	CRD1	Q07560	283 aa		5.08	□□□□□ -1.6
LAC1	YKL008C	CTT1	P06115	562 aa		5.07	□□□□□ -1.6
LAC1	YKL008C	RNR3	P21672	869 aa	Known RBP	5.07	□□□□□ -1.6
LAC1	YKL008C	VPS34	P22543	875 aa		5.07	□□□□□ -1.6
LAC1	YKL008C	MSH1	P25846	959 aa		5.07	□□□□□ -1.6
LAC1	YKL008C	UGP1	P32861	499 aa	Known RBP	5.07	□□□□□ -1.6
LAC1	YKL008C	RIX1	P38883	763 aa	Predicted RBP	5.07	□□□□□ -1.6
LAC1	YKL008C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
LAC1	YKL008C	ULA1	Q12059	462 aa		5.07	□□□□□ -1.6
LAC1	YKL008C	WHI2	P12611	486 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	APA1	P16550	321 aa	Known RBP	5.06	□□□□□ -1.6
LAC1	YKL008C	CDC5	P32562	705 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	SDH8	P38345	138 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	PAC2	P39937	518 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	UBX4	P54730	416 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	VPS64	Q03944	604 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	ARG7	Q04728	441 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	ARO10	Q06408	635 aa		5.06	□□□□□ -1.6
LAC1	YKL008C	ADE5,7	P07244	802 aa	Known RBP	5.05	□□□□□ -1.6
LAC1	YKL008C	PGI1	P12709	554 aa	Known RBP	5.05	□□□□□ -1.6
LAC1	YKL008C	POL3	P15436	1097 aa		5.05	□□□□□ -1.6
LAC1	YKL008C	PRP45	P28004	379 aa	Predicted RBP	5.05	□□□□□ -1.6
LAC1	YKL008C	FLO10	P36170	1169 aa		5.05	□□□□□ -1.6
LAC1	YKL008C	SPC72	P39723	622 aa		5.05	□□□□□ -1.6
LAC1	YKL008C	VPS27	P40343	622 aa	Known RBP	5.05	□□□□□ -1.6
LAC1	YKL008C	MRK1	P50873	501 aa		5.05	□□□□□ -1.6
LAC1	YKL008C	FMP30	Q02883	468 aa		5.05	□□□□□ -1.6
LAC1	YKL008C	ECM5	Q03214	1411 aa		5.05	□□□□□ -1.6
LAC1	YKL008C	TUB1	P09733	447 aa	Known RBP	5.04	□□□□□ -1.6
LAC1	YKL008C	PHO81	P17442	1178 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	SWI4	P25302	1093 aa	Known RBP	5.04	□□□□□ -1.6
LAC1	YKL008C	AAD3	P25612	363 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	MRPL9	P31334	269 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	PEX2	P32800	271 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	ARB1	P40024	610 aa	Known RBP	5.04	□□□□□ -1.6
LAC1	YKL008C	GFD1	Q04839	188 aa	Known RBP	5.04	□□□□□ -1.6
LAC1	YKL008C	ICL2	Q12031	575 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	TAD3	Q9URQ3	322 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	TY1B-DR4	Q07793	1604 aa		5.04	□□□□□ -1.6
LAC1	YKL008C	LEU2	P04173	364 aa	Predicted RBP	5.03	□□□□□ -1.6
LAC1	YKL008C	AAC1	P04710	309 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	RPL7A	P05737	244 aa	Known RBP	5.03	□□□□□ -1.6
LAC1	YKL008C	PMA2	P19657	947 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	SIR1	P21691	654 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	MCM3	P24279	971 aa	Known RBP	5.03	□□□□□ -1.6
LAC1	YKL008C	FRD1	P32614	470 aa	Known RBP	5.03	□□□□□ -1.6
LAC1	YKL008C	ACA1	P39970	489 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	YFL015C	P43578	164 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	WAR1	Q03631	944 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	CRF1	Q04930	467 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	PCL8	Q08966	492 aa		5.03	□□□□□ -1.6
LAC1	YKL008C	RPL7B	Q12213	244 aa	Known RBP	5.03	□□□□□ -1.6
LAC1	YKL008C	TCB3	Q03640	1545 aa	Known RBP	5.02	□□□□□ -1.61
LAC1	YKL008C	SEC3	P33332	1336 aa	Known RBP	5.02	□□□□□ -1.61
LAC1	YKL008C	ADE3	P07245	946 aa	Known RBP	5.02	□□□□□ -1.61
LAC1	YKL008C	RIT1	P23796	513 aa		5.02	□□□□□ -1.61
LAC1	YKL008C	YCR061W	P25639	631 aa		5.02	□□□□□ -1.61
LAC1	YKL008C	PAP2	P53632	584 aa	Known RBP	5.02	□□□□□ -1.61
LAC1	YKL008C	YNL092W	P53934	400 aa		5.02	□□□□□ -1.61
LAC1	YKL008C	YML119W	Q03208	357 aa		5.02	□□□□□ -1.61
LAC1	YKL008C	IWR1	Q07532	353 aa	Predicted RBP	5.02	□□□□□ -1.61
LAC1	YKL008C	SLK19	Q08581	821 aa	Known RBP	5.02	□□□□□ -1.61
LAC1	YKL008C	ARO9	P38840	513 aa	Predicted RBP	5.01	□□□□□ -1.61
LAC1	YKL008C	MTG2	P38860	518 aa		5.01	□□□□□ -1.61
LAC1	YKL008C	LNP1	P38878	278 aa		5.01	□□□□□ -1.61
LAC1	YKL008C	RPT2	P40327	437 aa	Known RBP	5.01	□□□□□ -1.61
LAC1	YKL008C	CAB2	P40506	365 aa		5.01	□□□□□ -1.61
LAC1	YKL008C	CPR6	P53691	371 aa	Known RBP	5.01	□□□□□ -1.61
LAC1	YKL008C	ESF2	P53743	316 aa	Known RBP	5.01	□□□□□ -1.61
LAC1	YKL008C	EIS1	Q05050	843 aa	Known RBP	5.01	□□□□□ -1.61
LAC1	YKL008C	AIM6	Q07716	390 aa		5.01	□□□□□ -1.61
LAC1	YKL008C	MIS1	P09440	975 aa	Known RBP	5	□□□□□ -1.61
LAC1	YKL008C	GDA1	P32621	518 aa		5	□□□□□ -1.61
LAC1	YKL008C	UBP16	Q02863	499 aa		5	□□□□□ -1.61
LAC1	YKL008C	ARA2	Q04212	335 aa		5	□□□□□ -1.61
LAC1	YKL008C	CRT10	Q08226	957 aa		5	□□□□□ -1.61
LAC1	YKL008C	AHA1	Q12449	350 aa	Known RBP	5	□□□□□ -1.61
LAC1	YKL008C	YER175W-A	Q8TGU4	54 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms