RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	MSH2	P25847	964 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	PEX3	P28795	441 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	CDC5	P32562	705 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	BUD2	P33314	1104 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	KEL2	P50090	882 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	ALT1	P52893	592 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	RPL6A	Q02326	176 aa	Known RBP	4.77	□□□□□ -1.65
PAN1	YIR006C	RPM2	Q02773	1202 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	THI7	Q05998	598 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	YLL007C	Q07799	665 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	NCR1	Q12200	1170 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	PSY3	Q12318	242 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	APM4	Q99186	491 aa		4.77	□□□□□ -1.65
PAN1	YIR006C	CAR1	P00812	333 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	TPK2	P06245	380 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	MPH2	P0CD99	609 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	YCR016W	P25617	290 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	PHO89	P38361	574 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	URA8	P38627	578 aa	Predicted RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	RFC3	P38629	340 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	EFM1	P38732	585 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	BRL1	P38770	471 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	CCC2	P38995	1004 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	DPH1	P40487	425 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	ALK1	P43633	760 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	ALG11	P53954	548 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	ORC4	P54791	529 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	EUG1	P32474	517 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	YKR015C	P36111	568 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	GLG1	P36143	616 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	ERC1	P38767	581 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	RIM8	P53179	542 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	RPL22B	P56628	122 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	INP2	Q03824	705 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	TIF35	Q04067	274 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	BUD22	Q04347	519 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	ADE13	Q05911	482 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	TUB2	P02557	457 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	DPB2	P24482	689 aa	Predicted RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	PER1	P25625	357 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	VPH1	P32563	840 aa	Known RBP	4.76	□□□□□ -1.65
PAN1	YIR006C	SUV3	P32580	737 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	SLM4	P38247	162 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	BIT2	P38346	545 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	RRN7	P40992	514 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	SAM37	P50110	327 aa		4.76	□□□□□ -1.65
PAN1	YIR006C	YEL076C-A	P0CX16	216 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	YLR464W	P0CX17	216 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	LCB1	P25045	558 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	PHO88	P38264	188 aa	Predicted RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	YEL076C	P39971	216 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	OPT1	P40897	799 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	PEX8	P53248	589 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	LSM3	P57743	89 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	REG1	Q00816	1014 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	DIG1	Q03063	452 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	CWC15	Q03772	175 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	YPR202W	Q08993	238 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	YDR018C	Q12185	396 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	YPR089W	O13585	888 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	TRP3	P00937	484 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	PRR1	P28708	518 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	TVP38	P36164	337 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	GLO3	P38682	493 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	MSR1	P38714	643 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	HSE1	P38753	452 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	TMN3	P40071	706 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	MRPS18	P42847	217 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	IRC6	P43615	237 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	ELP3	Q02908	557 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	HMO1	Q03973	246 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	PPM1	Q04081	328 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	HUA2	Q12134	243 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	CAD1	P24813	409 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	FLC2	P39719	783 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	RMD8	P43620	662 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	MUB1	Q03162	620 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	TAF12	Q03761	539 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	ARP9	Q05123	467 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	ERG20	P08524	352 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	ERG11	P10614	530 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	ATR1	P13090	542 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	OXP1	P28273	1286 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	HEM12	P32347	362 aa	Predicted RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	GDH2	P33327	1092 aa	Known RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	ETR1	P38071	380 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	SLX1	P38324	304 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	YBR259W	P38338	688 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	SPL2	P38839	148 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	PEP8	P40335	379 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	SDS3	P40505	327 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	MTR3	P48240	250 aa	Predicted RBP	4.75	□□□□□ -1.65
PAN1	YIR006C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
PAN1	YIR006C	YMR209C	Q03648	457 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	ARA2	Q04212	335 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	MUM3	Q08750	479 aa		4.75	□□□□□ -1.65
PAN1	YIR006C	GPH1	P06738	902 aa	Known RBP	4.74	□□□□□ -1.65
PAN1	YIR006C	BCY1	P07278	416 aa	Known RBP	4.74	□□□□□ -1.65
PAN1	YIR006C	WHI3	P34761	661 aa	Known RBP	4.74	□□□□□ -1.65
PAN1	YIR006C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms