RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C IRC13Q08630 104 aa3.84□□□□□ -1.79
RRP42YDL111C CDC31P06704 161 aaKnown RBP3.83□□□□□ -1.8
RRP42YDL111C SEC12P11655 471 aa3.83□□□□□ -1.8
RRP42YDL111C RIT1P23796 513 aa3.83□□□□□ -1.8
RRP42YDL111C RAD16P31244 790 aa3.83□□□□□ -1.8
RRP42YDL111C YBR138CP38277 524 aa3.83□□□□□ -1.8
RRP42YDL111C TDP1P38319 544 aa3.83□□□□□ -1.8
RRP42YDL111C SFB3P38810 929 aa3.83□□□□□ -1.8
RRP42YDL111C YER010CP40011 234 aa3.83□□□□□ -1.8
RRP42YDL111C HOS4P40480 1083 aa3.83□□□□□ -1.8
RRP42YDL111C CAB2P40506 365 aa3.83□□□□□ -1.8
RRP42YDL111C POL31P46957 487 aa3.83□□□□□ -1.8
RRP42YDL111C VPS73P53142 486 aaKnown RBP3.83□□□□□ -1.8
RRP42YDL111C MTL1P53214 551 aa3.83□□□□□ -1.8
RRP42YDL111C VPS64Q03944 604 aa3.83□□□□□ -1.8
RRP42YDL111C YFT2Q06676 274 aa3.83□□□□□ -1.8
RRP42YDL111C ADE3P07245 946 aaKnown RBP3.82□□□□□ -1.8
RRP42YDL111C PFK2P16862 959 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
RRP42YDL111C BET2P20133 325 aa3.82□□□□□ -1.8
RRP42YDL111C PRP28P23394 588 aa3.82□□□□□ -1.8
RRP42YDL111C CBF2P32504 956 aa3.82□□□□□ -1.8
RRP42YDL111C PAH1P32567 862 aa3.82□□□□□ -1.8
RRP42YDL111C COS111P38308 924 aa3.82□□□□□ -1.8
RRP42YDL111C VFA1P40080 203 aa3.82□□□□□ -1.8
RRP42YDL111C PIG2P40187 538 aa3.82□□□□□ -1.8
RRP42YDL111C NDE1P40215 560 aa3.82□□□□□ -1.8
RRP42YDL111C ESL1P40456 1118 aa3.82□□□□□ -1.8
RRP42YDL111C BST1P43571 1029 aa3.82□□□□□ -1.8
RRP42YDL111C TEL2P53038 688 aa3.82□□□□□ -1.8
RRP42YDL111C ACS1Q01574 713 aa3.82□□□□□ -1.8
RRP42YDL111C ATG21Q02887 496 aa3.82□□□□□ -1.8
RRP42YDL111C TRS31Q03337 283 aa3.82□□□□□ -1.8
RRP42YDL111C IMH1Q06704 911 aaKnown RBP3.82□□□□□ -1.8
RRP42YDL111C SDH5Q08230 162 aa3.82□□□□□ -1.8
RRP42YDL111C BNR1P40450 1375 aa3.81□□□□□ -1.8
RRP42YDL111C SEM1O94742 89 aa3.81□□□□□ -1.8
RRP42YDL111C FUM1P08417 488 aaKnown RBP3.81□□□□□ -1.8
RRP42YDL111C TUP1P16649 713 aa3.81□□□□□ -1.8
RRP42YDL111C CDC43P18898 376 aa3.81□□□□□ -1.8
RRP42YDL111C VPS33P20795 691 aa3.81□□□□□ -1.8
RRP42YDL111C SWI4P25302 1093 aaKnown RBP3.81□□□□□ -1.8
RRP42YDL111C FEN2P25621 512 aaKnown RBP3.81□□□□□ -1.8
RRP42YDL111C NTH1P32356 751 aa3.81□□□□□ -1.8
RRP42YDL111C BCS1P32839 456 aa3.81□□□□□ -1.8
RRP42YDL111C TEF4P36008 412 aaKnown RBP3.81□□□□□ -1.8
RRP42YDL111C IFA38P38286 347 aa3.81□□□□□ -1.8
RRP42YDL111C FMO1P38866 432 aa3.81□□□□□ -1.8
RRP42YDL111C AXL2P38928 823 aa3.81□□□□□ -1.8
RRP42YDL111C VPS8P39702 1274 aa3.81□□□□□ -1.8
RRP42YDL111C FMP52P40008 231 aa3.81□□□□□ -1.8
RRP42YDL111C YIL077CP40508 320 aa3.81□□□□□ -1.8
RRP42YDL111C CBK1P53894 756 aa3.81□□□□□ -1.8
RRP42YDL111C TRM8Q12009 286 aa3.81□□□□□ -1.8
RRP42YDL111C ENT1Q12518 454 aa3.81□□□□□ -1.8
RRP42YDL111C CTT1P06115 562 aa3.8□□□□□ -1.8
RRP42YDL111C TUB1P09733 447 aaKnown RBP3.8□□□□□ -1.8
RRP42YDL111C MRP7P12687 371 aa3.8□□□□□ -1.8
RRP42YDL111C GUK1P15454 187 aaKnown RBP3.8□□□□□ -1.8
RRP42YDL111C KIN3P22209 435 aa3.8□□□□□ -1.8
RRP42YDL111C ILV6P25605 309 aaKnown RBP3.8□□□□□ -1.8
RRP42YDL111C ARP2P32381 391 aaKnown RBP3.8□□□□□ -1.8
RRP42YDL111C PEX2P32800 271 aa3.8□□□□□ -1.8
RRP42YDL111C PPZ2P33329 710 aa3.8□□□□□ -1.8
RRP42YDL111C BCD1P38772 366 aa3.8□□□□□ -1.8
RRP42YDL111C YJL193WP39542 402 aa3.8□□□□□ -1.8
RRP42YDL111C YEL025CP39991 1188 aa3.8□□□□□ -1.8
RRP42YDL111C LRO1P40345 661 aa3.8□□□□□ -1.8
RRP42YDL111C RIC1P40395 1056 aa3.8□□□□□ -1.8
RRP42YDL111C DPH1P40487 425 aaKnown RBP3.8□□□□□ -1.8
RRP42YDL111C UBC11P52492 156 aa3.8□□□□□ -1.8
RRP42YDL111C RRT6P53117 311 aaPredicted RBP3.8□□□□□ -1.8
RRP42YDL111C IMO32P53219 342 aa3.8□□□□□ -1.8
RRP42YDL111C YPL108WQ02872 168 aaPredicted RBP3.8□□□□□ -1.8
RRP42YDL111C SPC19Q03954 165 aa3.8□□□□□ -1.8
RRP42YDL111C COQ11Q05892 277 aa3.8□□□□□ -1.8
RRP42YDL111C AIM6Q07716 390 aa3.8□□□□□ -1.8
RRP42YDL111C CHS5Q12114 671 aaKnown RBP3.8□□□□□ -1.8
RRP42YDL111C TPK1P06244 397 aa3.79□□□□□ -1.8
RRP42YDL111C CDC16P09798 840 aa3.79□□□□□ -1.8
RRP42YDL111C SAN1P22470 610 aa3.79□□□□□ -1.8
RRP42YDL111C VPS34P22543 875 aa3.79□□□□□ -1.8
RRP42YDL111C SWC3P31376 625 aa3.79□□□□□ -1.8
RRP42YDL111C MVD1P32377 396 aaKnown RBP3.79□□□□□ -1.8
RRP42YDL111C CNS1P33313 385 aa3.79□□□□□ -1.8
RRP42YDL111C HIS7P33734 552 aaKnown RBP3.79□□□□□ -1.8
RRP42YDL111C DHR2P36009 735 aaPredicted RBP3.79□□□□□ -1.8
RRP42YDL111C MUD2P36084 527 aaKnown RBP3.79□□□□□ -1.8
RRP42YDL111C SET3P36124 751 aa3.79□□□□□ -1.8
RRP42YDL111C EHT1P38295 451 aa3.79□□□□□ -1.8
RRP42YDL111C RIX1P38883 763 aaPredicted RBP3.79□□□□□ -1.8
RRP42YDL111C REV7P38927 245 aa3.79□□□□□ -1.8
RRP42YDL111C UPF3P48412 387 aaKnown RBP3.79□□□□□ -1.8
RRP42YDL111C PSP1P50896 841 aaKnown RBP3.79□□□□□ -1.8
RRP42YDL111C SSL2Q00578 843 aa3.79□□□□□ -1.8
RRP42YDL111C ARR3Q06598 404 aa3.79□□□□□ -1.8
RRP42YDL111C SIR3P06701 978 aa3.78□□□□□ -1.8
RRP42YDL111C MSS1P32559 526 aaPredicted RBP3.78□□□□□ -1.8
RRP42YDL111C DSS4P32601 143 aa3.78□□□□□ -1.8
RRP42YDL111C NOP4P37838 685 aaKnown RBP3.78□□□□□ -1.8
RRP42YDL111C TMN3P40071 706 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms