RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YKR078WP36158 585 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C YBL036CP38197 257 aa4.19□□□□□ -1.74
PTA1YAL043C PHO89P38361 574 aa4.19□□□□□ -1.74
PTA1YAL043C APE4P38821 490 aa4.19□□□□□ -1.74
PTA1YAL043C ERP2P39704 215 aa4.19□□□□□ -1.74
PTA1YAL043C GEM1P39722 662 aa4.19□□□□□ -1.74
PTA1YAL043C PEP8P40335 379 aa4.19□□□□□ -1.74
PTA1YAL043C ALG5P40350 334 aa4.19□□□□□ -1.74
PTA1YAL043C DPH1P40487 425 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C YIL054WP40524 105 aa4.19□□□□□ -1.74
PTA1YAL043C CNN1P43618 361 aa4.19□□□□□ -1.74
PTA1YAL043C YJL045WP47052 634 aa4.19□□□□□ -1.74
PTA1YAL043C MAD3P47074 515 aa4.19□□□□□ -1.74
PTA1YAL043C PSP2P50109 593 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C AGE1Q04412 482 aa4.19□□□□□ -1.74
PTA1YAL043C FAP7Q12055 197 aaPredicted RBP4.19□□□□□ -1.74
PTA1YAL043C ERP3Q12403 225 aa4.19□□□□□ -1.74
PTA1YAL043C GAL10P04397 699 aa4.18□□□□□ -1.74
PTA1YAL043C ILS1P09436 1072 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C MSS116P15424 664 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C PDC5P16467 563 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C EST1P17214 699 aaPredicted RBP4.18□□□□□ -1.74
PTA1YAL043C ART10P18634 518 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C LRE1P25579 583 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C CDC3P32457 520 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C CYM1P32898 989 aa4.18□□□□□ -1.74
PTA1YAL043C IXR1P33417 597 aa4.18□□□□□ -1.74
PTA1YAL043C ASK1P35734 292 aa4.18□□□□□ -1.74
PTA1YAL043C KES1P35844 434 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C SLM4P38247 162 aa4.18□□□□□ -1.74
PTA1YAL043C MMS21P38632 267 aa4.18□□□□□ -1.74
PTA1YAL043C FTR1P40088 404 aa4.18□□□□□ -1.74
PTA1YAL043C GVP36P40531 326 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C PRM2P40534 656 aa4.18□□□□□ -1.74
PTA1YAL043C TAH11P47112 604 aa4.18□□□□□ -1.74
PTA1YAL043C MRM2P53123 320 aa4.18□□□□□ -1.74
PTA1YAL043C SNU56Q03782 492 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C CSN9Q03981 162 aa4.18□□□□□ -1.74
PTA1YAL043C COQ9Q05779 260 aa4.18□□□□□ -1.74
PTA1YAL043C ASA1Q06822 443 aa4.18□□□□□ -1.74
PTA1YAL043C SUB2Q07478 446 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C SLF1Q12034 447 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C SLP1Q12232 587 aa4.18□□□□□ -1.74
PTA1YAL043C HSP42Q12329 375 aa4.18□□□□□ -1.74
PTA1YAL043C YPR089WO13585 888 aa4.18□□□□□ -1.74
PTA1YAL043C TUB1P09733 447 aaKnown RBP4.18□□□□□ -1.74
PTA1YAL043C HSF1P10961 833 aa4.18□□□□□ -1.74
PTA1YAL043C MRPS28P21771 286 aa4.18□□□□□ -1.74
PTA1YAL043C UTR2P32623 467 aa4.18□□□□□ -1.74
PTA1YAL043C AIM26P32858 118 aa4.18□□□□□ -1.74
PTA1YAL043C TRM2P33753 639 aa4.18□□□□□ -1.74
PTA1YAL043C PTH2P34222 208 aa4.18□□□□□ -1.74
PTA1YAL043C ECM4P36156 370 aa4.18□□□□□ -1.74
PTA1YAL043C TBS1P38114 1094 aa4.18□□□□□ -1.74
PTA1YAL043C NPP2P39997 493 aa4.18□□□□□ -1.74
PTA1YAL043C PDS1P40316 373 aaPredicted RBP4.18□□□□□ -1.74
PTA1YAL043C NCS6P53088 359 aa4.18□□□□□ -1.74
PTA1YAL043C CUL3P53202 744 aa4.18□□□□□ -1.74
PTA1YAL043C IST1P53843 298 aaPredicted RBP4.18□□□□□ -1.74
PTA1YAL043C RPM2Q02773 1202 aa4.18□□□□□ -1.74
PTA1YAL043C SKI8Q02793 397 aaPredicted RBP4.18□□□□□ -1.74
PTA1YAL043C ROD1Q02805 837 aa4.18□□□□□ -1.74
PTA1YAL043C YMR321CQ04898 105 aa4.18□□□□□ -1.74
PTA1YAL043C YOR389WQ08912 624 aa4.18□□□□□ -1.74
PTA1YAL043C LDB17Q12342 491 aa4.18□□□□□ -1.74
PTA1YAL043C MMP1Q12372 583 aa4.18□□□□□ -1.74
PTA1YAL043C PAB1P04147 577 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
PTA1YAL043C YER152CP10356 443 aa4.17□□□□□ -1.74
PTA1YAL043C YAK1P14680 807 aa4.17□□□□□ -1.74
PTA1YAL043C SFL1P20134 766 aa4.17□□□□□ -1.74
PTA1YAL043C GID7P25569 745 aa4.17□□□□□ -1.74
PTA1YAL043C NIP1P32497 812 aaKnown RBP4.17□□□□□ -1.74
PTA1YAL043C ABD1P32783 436 aaPredicted RBP4.17□□□□□ -1.74
PTA1YAL043C SEC6P32844 805 aa4.17□□□□□ -1.74
PTA1YAL043C STE5P32917 917 aa4.17□□□□□ -1.74
PTA1YAL043C SEC66P33754 206 aa4.17□□□□□ -1.74
PTA1YAL043C COY1P34237 679 aa4.17□□□□□ -1.74
PTA1YAL043C PTC1P35182 281 aa4.17□□□□□ -1.74
PTA1YAL043C MSR1P38714 643 aa4.17□□□□□ -1.74
PTA1YAL043C RIM4P38741 713 aa4.17□□□□□ -1.74
PTA1YAL043C NPT1P39683 429 aaKnown RBP4.17□□□□□ -1.74
PTA1YAL043C SCC4P40090 624 aa4.17□□□□□ -1.74
PTA1YAL043C HPM1P40481 377 aa4.17□□□□□ -1.74
PTA1YAL043C MPH1P40562 993 aa4.17□□□□□ -1.74
PTA1YAL043C PAN2P53010 1115 aaPredicted RBP4.17□□□□□ -1.74
PTA1YAL043C HOS2P53096 452 aaPredicted RBP4.17□□□□□ -1.74
PTA1YAL043C YGL036WP53185 909 aaPredicted RBP4.17□□□□□ -1.74
PTA1YAL043C DOT1Q04089 582 aaKnown RBP4.17□□□□□ -1.74
PTA1YAL043C SGT2Q12118 346 aaKnown RBP4.17□□□□□ -1.74
PTA1YAL043C ASP3-2P0CX77 362 aa4.17□□□□□ -1.74
PTA1YAL043C ASP3-3P0CX78 362 aa4.17□□□□□ -1.74
PTA1YAL043C ASP3-4P0CX79 362 aa4.17□□□□□ -1.74
PTA1YAL043C ASP3-1P0CZ17 362 aa4.17□□□□□ -1.74
PTA1YAL043C SBA1P28707 216 aaKnown RBP4.17□□□□□ -1.74
PTA1YAL043C ZUO1P32527 433 aaKnown RBP4.17□□□□□ -1.74
PTA1YAL043C NPL6P32832 435 aa4.17□□□□□ -1.74
PTA1YAL043C OCT1P35999 772 aa4.17□□□□□ -1.74
PTA1YAL043C TVP38P36164 337 aa4.17□□□□□ -1.74
PTA1YAL043C FLR1P38124 548 aa4.17□□□□□ -1.74
PTA1YAL043C HSL7P38274 827 aa4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms