RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 FAM217BQ9NTX9 383 aaPredicted RBP19.05■□□□□ 0.64
HNRNPU-228ENST00000640306 ZSWIM5Q9P217 1185 aa19.05■□□□□ 0.64
HNRNPU-228ENST00000640306 FANCGO15287 622 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 CDKL5O76039 1030 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 TOP1P11387 765 aaKnown RBP19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 BMP6P22004 513 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 ARHGAP29Q52LW3 1261 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 JMYQ8N9B5 988 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 IGDCC4Q8TDY8 1250 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.04■□□□□ 0.641e-13■□□□□ 10.1
HNRNPU-228ENST00000640306 ARMT1Q9H993 441 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 TRMT112Q9UI30 125 aaKnown RBP19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 TUBE1Q9UJT0 475 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 PSDA5PKW4 1024 aaPredicted RBP19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 KIF2AO00139 706 aaPredicted RBP19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 IKBKBO14920 756 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 PRKAB2O43741 272 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 NTRK3Q16288 839 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 LY9Q9HBG7 655 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.04■□□□□ 0.642e-12■■■■□ 23
HNRNPU-228ENST00000640306 SLC12A7Q9Y666 1083 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 TACC3Q9Y6A5 838 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 KCPQ6ZWJ8 1503 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 IRS4O14654 1257 aaPredicted RBP19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 MBD4O95243 580 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 MAGEB6Q8N7X4 407 aa19.04■□□□□ 0.64
HNRNPU-228ENST00000640306 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 RESP18Q5W5W9 173 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NAPBQ9H115 298 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 EPB41L4AQ9HCS5 686 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 LAMB4A4D0S4 1761 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NUP188Q5SRE5 1749 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 PRR29P0C7W0 189 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 ETF1P62495 437 aaKnown RBP19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NR5A1Q13285 461 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 KRBA2Q6ZNG9 492 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NLRP10Q86W26 655 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 TICAM2Q86XR7 235 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 L2HGDHQ9H9P8 463 aa19.03■□□□□ 0.64
HNRNPU-228ENST00000640306 A0A0G2JS52 829 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 PPP6R2O75170 966 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 ADKP55263 362 aaKnown RBP19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 CTSWP56202 376 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 PIGBQ92521 554 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 POLR2DO15514 142 aaKnown RBP19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 SLFN14P0C7P3 912 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 CDK11BP21127 795 aaKnown RBP19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 SSRP1Q08945 709 aaKnown RBP19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 NUP133Q8WUM0 1156 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 STRBPQ96SI9 672 aaKnown RBP19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 KCND1Q9NSA2 647 aa19.02■□□□□ 0.64
HNRNPU-228ENST00000640306 KIF20AO95235 890 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 CARD10Q9BWT7 1032 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 PKD1L3Q7Z443 1732 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 PDE8BO95263 885 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 CLCN6P51797 869 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 FMR1Q06787 632 aaKnown RBP eCLIP19.01■□□□□ 0.637e-12■□□□□ 10.3
HNRNPU-228ENST00000640306 DIS3L2Q8IYB7 885 aaKnown RBP19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 MIGA1Q8NAN2 632 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 ZBTB9Q96C00 473 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 TIGD1Q96MW7 591 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 CARD6Q9BX69 1037 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 hCG_1642624A0A1W2PR95 340 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 ERICH4A6NGS2 130 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 GIGYF2Q6Y7W6 1299 aaKnown RBP19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 USP49Q70CQ1 688 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 VSTM4Q8IW00 320 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 IFNL3Q8IZI9 196 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 IQSEC3Q9UPP2 1182 aaPredicted RBP19.01■□□□□ 0.63
HNRNPU-228ENST00000640306 KRI1Q8N9T8 703 aaKnown RBP19■□□□□ 0.63
HNRNPU-228ENST00000640306 MNS1Q8NEH6 495 aa19■□□□□ 0.63
HNRNPU-228ENST00000640306 FBXO3Q9UK99 471 aa19■□□□□ 0.63
HNRNPU-228ENST00000640306 MAP3K15Q6ZN16 1313 aa19■□□□□ 0.63
HNRNPU-228ENST00000640306 TOB1P50616 345 aaPredicted RBP19■□□□□ 0.63
HNRNPU-228ENST00000640306 TTF1Q15361 905 aaPredicted RBP19■□□□□ 0.63
HNRNPU-228ENST00000640306 TRIM65Q6PJ69 517 aa19■□□□□ 0.63
HNRNPU-228ENST00000640306 NOSTRINQ8IVI9 506 aa19■□□□□ 0.63
HNRNPU-228ENST00000640306 NFE2L3Q9Y4A8 694 aa19■□□□□ 0.63
HNRNPU-228ENST00000640306 MYO5AQ9Y4I1 1855 aaKnown RBP18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 SMIM22K7EJ46 135 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 CBFA2T2O43439 604 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 CUTAO60888 179 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 TRIM28Q13263 835 aaKnown RBP18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 UBE3CQ15386 1083 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 VGLL2Q8N8G2 317 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 UBXN4Q92575 508 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 DESI2Q9BSY9 194 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 PCDHB6Q9Y5E3 794 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 STARD3NLO95772 234 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 REXO1L1PQ8IX06 675 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 OXER1Q8TDS5 423 aa18.99■□□□□ 0.63
HNRNPU-228ENST00000640306 TMEM87BQ96K49 555 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms