RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CDC45O75419 566 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 STAM2O75886 525 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 EIF6P56537 245 aaKnown RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 NBR1Q14596 966 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 KRT24Q2M2I5 525 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 CAVIN4Q5BKX8 364 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 ELOA2Q8IYF1 753 aaPredicted RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 CERS5Q8N5B7 392 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 CCDC102AQ96A19 550 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 MBOAT7Q96N66 472 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 UPF3AQ9H1J1 476 aaKnown RBP7.89□□□□□ -1.15
RTTN-215ENST00000639487 SH3GLB2Q9NR46 395 aa7.89□□□□□ -1.15
RTTN-215ENST00000639487 PIK3CDO00329 1044 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 VEGFAP15692 232 aaPredicted RBP7.88□□□□□ -1.15
RTTN-215ENST00000639487 CLEC17AQ6ZS10 378 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 CHD1LQ86WJ1 897 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 ZNF592Q92610 1267 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 PPP4R2Q9NY27 417 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 CANXP27824 592 aaKnown RBP7.88□□□□□ -1.15
RTTN-215ENST00000639487 HOXC8P31273 242 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 TNNI2P48788 182 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 CXCL9Q07325 125 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 MYOZ2Q9NPC6 264 aa7.88□□□□□ -1.15
RTTN-215ENST00000639487 LIFRP42702 1097 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 WASHC4Q2M389 1173 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 UBE2Q1Q7Z7E8 422 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 MAP4K1Q92918 833 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 MANSC4A6NHS7 340 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 PPM1GO15355 546 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 WDHD1O75717 1129 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 CST5P28325 142 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 MCAMP43121 646 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 PDE1AP54750 535 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 SESTD1Q86VW0 696 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.87□□□□□ -1.15
RTTN-215ENST00000639487 A0A1B0GUL7 405 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 BCAR3O75815 825 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 HMGB1P09429 215 aaKnown RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 XRCC5P13010 732 aaKnown RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 TNNT2P45379 298 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 CWF19L2Q2TBE0 894 aaKnown RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 DCAF15Q66K64 600 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 UBE3BQ7Z3V4 1068 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 RBM27Q9P2N5 1060 aaKnown RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 PCDHB15Q9Y5E8 787 aa7.87□□□□□ -1.15
RTTN-215ENST00000639487 U3KPZ7 1027 aaPredicted RBP7.87□□□□□ -1.15
RTTN-215ENST00000639487 PTCD1O75127 700 aaKnown RBP7.86□□□□□ -1.15
RTTN-215ENST00000639487 RASA3Q14644 834 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 GPR153Q6NV75 609 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 MAMDC4Q6UXC1 1216 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 RPAINQ86UA6 219 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 CNNM2Q9H8M5 875 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 CEP126Q9P2H0 1117 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 HELZP42694 1942 aaKnown RBP7.86□□□□□ -1.15
RTTN-215ENST00000639487 PLXNA3P51805 1871 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 RNF113AO15541 343 aaKnown RBP7.86□□□□□ -1.15
RTTN-215ENST00000639487 CNNM4Q6P4Q7 775 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 DGKHQ86XP1 1220 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 ZNF287Q9HBT7 754 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 TBC1D2BQ9UPU7 963 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 AFG3L2Q9Y4W6 797 aa7.86□□□□□ -1.15
RTTN-215ENST00000639487 PATL2C9JE40 543 aaKnown RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 PTPN11Q06124 597 aaPredicted RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 C12orf60Q5U649 245 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 CDC37L1Q7L3B6 337 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 SNX21Q969T3 373 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 ZNF341Q9BYN7 854 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 GLT8D2Q9H1C3 349 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 TMX2Q9Y320 296 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 DAGLAQ9Y4D2 1042 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 NUP210Q8TEM1 1887 aaPredicted RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 DDAH1O94760 285 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 CYP2E1P05181 493 aaPredicted RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 RASGRF1Q13972 1273 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 GALNT17Q6IS24 598 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 RASAL3Q86YV0 1011 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 PXYLP1Q8TE99 480 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 EAF2Q96CJ1 260 aaPredicted RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 STRBPQ96SI9 672 aaKnown RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 C9orf78Q9NZ63 289 aaPredicted RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 NYNRINQ9P2P1 1898 aaKnown RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 FAM198AQ9UFP1 575 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 A0A1W2PPC1 479 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 CAND2O75155 1236 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 COL6A1P12109 1028 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 POU5F1Q01860 360 aaKnown RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 SNX17Q15036 470 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 SUPT20HL1Q3ZLR7 823 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 CRYGNQ8WXF5 182 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 ARMC5Q96C12 935 aa7.85□□□□□ -1.15
RTTN-215ENST00000639487 ZNF70Q9UC06 446 aaPredicted RBP7.85□□□□□ -1.15
RTTN-215ENST00000639487 USP17L8P0C7I0 530 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 CHRM1P11229 460 aaPredicted RBP7.84□□□□□ -1.15
RTTN-215ENST00000639487 CCDC158Q5M9N0 1113 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 TEKT1Q969V4 418 aa7.84□□□□□ -1.15
RTTN-215ENST00000639487 KLRG1Q96E93 195 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms