RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 LRRC59Q96AG4 307 aaKnown RBP9.71□□□□□ -0.85
CHD2-226ENST00000636881 AIFM3Q96NN9 605 aa9.71□□□□□ -0.85
CHD2-226ENST00000636881 METTL22Q9BUU2 404 aaPredicted RBP9.71□□□□□ -0.85
CHD2-226ENST00000636881 MED4Q9NPJ6 270 aa9.71□□□□□ -0.85
CHD2-226ENST00000636881 MAN1B1Q9UKM7 699 aa9.71□□□□□ -0.85
CHD2-226ENST00000636881 TSPOAP1O95153 1857 aa9.71□□□□□ -0.85
CHD2-226ENST00000636881 FOXN1O15353 648 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 PIP4K2BP78356 416 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 TRDNQ13061 729 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 AMOTQ4VCS5 1084 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 TTC39AQ5SRH9 613 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 KRT40Q6A162 431 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 FOXP4Q8IVH2 680 aaPredicted RBP9.71□□□□□ -0.86
CHD2-226ENST00000636881 PANX2Q96RD6 677 aa9.71□□□□□ -0.86
CHD2-226ENST00000636881 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHD2-226ENST00000636881 TUBBP07437 444 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 FMR1Q06787 632 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD2-226ENST00000636881 POSTNQ15063 836 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 SPECC1Q5M775 1068 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 RAD9BQ6WBX8 426 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 MICALL1Q8N3F8 863 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 MLKLQ8NB16 471 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 RGS22Q8NE09 1264 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 NCOA7Q8NI08 942 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 NAPGQ99747 312 aaPredicted RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 NAA15Q9BXJ9 866 aaKnown RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 SAMSN1Q9NSI8 373 aaKnown RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 M0R2C6 588 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 PPFIA4O75335 1185 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 AKAP17AQ02040 695 aaKnown RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 DNAJC21Q5F1R6 531 aaKnown RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 ARHGEF25Q86VW2 580 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 IGSF22Q8N9C0 903 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 MYCBPQ99417 103 aaPredicted RBP9.7□□□□□ -0.86
CHD2-226ENST00000636881 HPS5Q9UPZ3 1129 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 CDKL5O76039 1030 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 BMP6P22004 513 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 TIMM10P62072 90 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 PTPAQ15257 358 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 WHAMMP3Q1A5X7 153 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 EFCAB13Q8IY85 973 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 TNRQ92752 1358 aa9.7□□□□□ -0.86
CHD2-226ENST00000636881 A0A0U1RQJ8 604 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 RNF40O75150 1001 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 ATP2B1P20020 1258 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 RBL2Q08999 1139 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 GPATCH11Q8N954 259 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 CCDC148Q8NFR7 591 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 ATRIPQ8WXE1 791 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 CDC5LQ99459 802 aaKnown RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 A0A087WZG4 1122 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 ZNF18P17022 549 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 METAP2P50579 478 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD2-226ENST00000636881 PDIA6Q15084 440 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 FILIP1LQ4L180 1135 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 FBXL16Q8N461 479 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 CTCFLQ8NI51 663 aaPredicted RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 SMARCC1Q92922 1105 aaPredicted RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 FAM107BQ9H098 131 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 RNF216Q9NWF9 866 aaPredicted RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 TTF2Q9UNY4 1162 aaKnown RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 FAM237AA0A1B0GTK4 181 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 LRRIQ3A6PVS8 624 aaPredicted RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 TFRCP02786 760 aaKnown RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 FKBP4Q02790 459 aaKnown RBP eCLIP9.69□□□□□ -0.86
CHD2-226ENST00000636881 NR1I3Q14994 352 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 LMBR1LQ6UX01 489 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 ANKRD13DQ6ZTN6 518 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 NCAPGQ9BPX3 1015 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
CHD2-226ENST00000636881 SERTAD1Q9UHV2 236 aa9.69□□□□□ -0.86
CHD2-226ENST00000636881 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 TEX33O43247 280 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 PTCD1O75127 700 aaKnown RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 PRR29P0C7W0 189 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 RXRAP19793 462 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 SART3Q15020 963 aaKnown RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 MAP9Q49MG5 647 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 KLHL10Q6JEL2 608 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 MB21D2Q8IYB1 491 aaPredicted RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 STK11IPQ8N1F8 1099 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 DIP2AQ14689 1571 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 A0A087WUV0 522 aaPredicted RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 ZNF213O14771 459 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 POLR2DO15514 142 aaKnown RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 LTKP29376 864 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 EIF5P55010 431 aaKnown RBP9.68□□□□□ -0.86
CHD2-226ENST00000636881 SLC39A6Q13433 755 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 TADA2BQ86TJ2 420 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 ACRBPQ8NEB7 543 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 PHKBQ93100 1093 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 OSBP2Q969R2 916 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
CHD2-226ENST00000636881 PLCD1P51178 756 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms