RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 BPNT1O95861 308 aa6.4□□□□□ -1.39
CDR1-202ENST00000625883 KIF4BQ2VIQ3 1234 aa6.4□□□□□ -1.39
CDR1-202ENST00000625883 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.39
CDR1-202ENST00000625883 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.39
CDR1-202ENST00000625883 ACSBG1Q96GR2 724 aa6.4□□□□□ -1.39
CDR1-202ENST00000625883 WDR18Q9BV38 432 aa6.4□□□□□ -1.39
CDR1-202ENST00000625883 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 RAC1P63000 192 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 CLCQ05315 142 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 RBL2Q08999 1139 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
CDR1-202ENST00000625883 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 REXO1Q8N1G1 1221 aaKnown RBP6.39□□□□□ -1.39
CDR1-202ENST00000625883 ZNF408Q9H9D4 720 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 STRIP2Q9ULQ0 834 aa6.39□□□□□ -1.39
CDR1-202ENST00000625883 AOC2O75106 756 aa6.38□□□□□ -1.39
CDR1-202ENST00000625883 SSBP05455 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
CDR1-202ENST00000625883 MCM4P33991 863 aa6.38□□□□□ -1.39
CDR1-202ENST00000625883 ZNF165P49910 485 aa6.38□□□□□ -1.39
CDR1-202ENST00000625883 TRIM28Q13263 835 aaKnown RBP6.38□□□□□ -1.39
CDR1-202ENST00000625883 DCAF11Q8TEB1 546 aa6.38□□□□□ -1.39
CDR1-202ENST00000625883 SHDQ96IW2 340 aa6.38□□□□□ -1.39
CDR1-202ENST00000625883 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
CDR1-202ENST00000625883 MRVI1Q9Y6F6 885 aa6.38□□□□□ -1.39
CDR1-202ENST00000625883 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 GRIN3BO60391 1043 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 STK10O94804 968 aaKnown RBP6.37□□□□□ -1.39
CDR1-202ENST00000625883 SPATA31C1P0DKV0 1188 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 ETFBP38117 255 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 DUOXA2Q1HG44 320 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 ZC3H12AQ5D1E8 599 aaKnown RBP6.37□□□□□ -1.39
CDR1-202ENST00000625883 HP1BP3Q5SSJ5 553 aaPredicted RBP6.37□□□□□ -1.39
CDR1-202ENST00000625883 GK5Q6ZS86 529 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 KIAA1211Q6ZU35 1233 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 CYFIP1Q7L576 1253 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 TMPRSS13Q9BYE2 586 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 EHMT1Q9H9B1 1298 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 ZNRF3Q9ULT6 936 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 PCDHB14Q9Y5E9 798 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 SNCAIPQ9Y6H5 919 aa6.37□□□□□ -1.39
CDR1-202ENST00000625883 SYNGAP1Q96PV0 1343 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 PRR36Q9H6K5 1346 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 ATE1O95260 518 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 ELNP15502 786 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 RING1Q06587 406 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 EXOSC6Q5RKV6 272 aaKnown RBP6.36□□□□□ -1.39
CDR1-202ENST00000625883 DIEXFQ68CQ4 756 aaKnown RBP6.36□□□□□ -1.39
CDR1-202ENST00000625883 ACAD11Q709F0 780 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 DCAF5Q96JK2 942 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 NACC1Q96RE7 527 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 LNPKQ9C0E8 428 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 CORINQ9Y5Q5 1042 aa6.36□□□□□ -1.39
CDR1-202ENST00000625883 MEGF11A6BM72 1044 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 TMPRSS2O15393 492 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 APBA3O96018 575 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 IGHA1P01876 353 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 GIPRP48546 466 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 IGF2-ASQ6U949 168 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 DPH6Q7L8W6 267 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.35□□□□□ -1.39
CDR1-202ENST00000625883 HDXQ7Z353 690 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 C12orf40Q86WS4 652 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 FAM169BQ8N8A8 192 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 ANAPC16Q96DE5 110 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 FERD3LQ96RJ6 166 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 RUSC1Q9BVN2 902 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 HIRIP3Q9BW71 556 aaPredicted RBP6.35□□□□□ -1.39
CDR1-202ENST00000625883 PPP1R9AQ9ULJ8 1098 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 CSADQ9Y600 493 aa6.35□□□□□ -1.39
CDR1-202ENST00000625883 HNRNPUQ00839 825 aaKnown RBP eCLIP6.34□□□□□ -1.39
CDR1-202ENST00000625883 GRIK4Q16099 956 aa6.34□□□□□ -1.39
CDR1-202ENST00000625883 SHISA2Q6UWI4 295 aa6.34□□□□□ -1.39
CDR1-202ENST00000625883 CPLX3Q8WVH0 158 aa6.34□□□□□ -1.39
CDR1-202ENST00000625883 SUGCTQ9HAC7 445 aa6.34□□□□□ -1.39
CDR1-202ENST00000625883 RAD18Q9NS91 495 aa6.34□□□□□ -1.39
CDR1-202ENST00000625883 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
CDR1-202ENST00000625883 HTR3BO95264 441 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 SLFN14P0C7P3 912 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 NTF4P34130 210 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 GSK3AP49840 483 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 EIF6P56537 245 aaKnown RBP6.34□□□□□ -1.4
CDR1-202ENST00000625883 ERVK-24P63145 666 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 ID3Q02535 119 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 AKAP4Q5JQC9 854 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 PPM1JQ5JR12 505 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 FBXW10Q5XX13 1052 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.4
CDR1-202ENST00000625883 RBBP8NLQ8NC74 664 aaPredicted RBP6.34□□□□□ -1.4
CDR1-202ENST00000625883 SMG8Q8ND04 991 aaKnown RBP6.34□□□□□ -1.4
CDR1-202ENST00000625883 PMFBP1Q8TBY8 1022 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 MRPL18Q9H0U6 180 aaKnown RBP6.34□□□□□ -1.4
CDR1-202ENST00000625883 RNF208Q9H0X6 261 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 CRIM1Q9NZV1 1036 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 TACC3Q9Y6A5 838 aa6.34□□□□□ -1.4
CDR1-202ENST00000625883 PRAMEF27A3QJZ7 478 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 F8W735 103 aaPredicted RBP6.33□□□□□ -1.4
CDR1-202ENST00000625883 KLF4O43474 513 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 DNAJA2O60884 412 aa6.33□□□□□ -1.4
CDR1-202ENST00000625883 TIAF1O95411 115 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms