RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TOMM22Q9NS69 142 aa22.97■■□□□ 1.27
PCDHB11-202ENST00000624887 TFCP2L1Q9NZI6 479 aa22.97■■□□□ 1.27
PCDHB11-202ENST00000624887 IRS2Q9Y4H2 1338 aa22.97■■□□□ 1.27
PCDHB11-202ENST00000624887 SYNE3Q6ZMZ3 975 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 GJB4Q9NTQ9 266 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 DYNLL1P63167 89 aaKnown RBP22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 KIF23Q02241 960 aaPredicted RBP22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 TYRO3Q06418 890 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 TXNRD1Q16881 649 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 TMED8Q6PL24 325 aaPredicted RBP22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 CCAR1Q8IX12 1150 aaKnown RBP22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 TMTC2Q8N394 836 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 CNBD1Q8NA66 436 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 MYL10Q9BUA6 226 aa22.96■■□□□ 1.27
PCDHB11-202ENST00000624887 UBR3Q6ZT12 1888 aa22.95■■□□□ 1.27
PCDHB11-202ENST00000624887 MINDY4BA8MYZ0 360 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 HMGB2P26583 209 aaKnown RBP22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 IARSP41252 1262 aaKnown RBP22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 GRAPQ13588 217 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 WTAPQ15007 396 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 MYSM1Q5VVJ2 828 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 CCDC144CPQ8IYA2 1237 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 PROM2Q8N271 834 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 GRAPLQ8TC17 118 aaPredicted RBP22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 POLR3EQ9NVU0 708 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 STK36Q9NRP7 1315 aa22.95■■□□□ 1.26
PCDHB11-202ENST00000624887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 ERICH2A1L162 156 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 POLR3DP05423 398 aaPredicted RBP22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 MECOMQ03112 1051 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 CKAP2LQ8IYA6 745 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 PHKBQ93100 1093 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 MRVI1Q9Y6F6 885 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 ECM29Q5VYK3 1845 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 PLSCR1O15162 318 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 RANBP6O60518 1105 aaKnown RBP22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 YEATS4O95619 227 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 ME1P48163 572 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 RCAN1P53805 252 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 LINC00301Q8NCQ3 95 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 AIFM3Q96NN9 605 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 CCDC39Q9UFE4 941 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 USP25Q9UHP3 1055 aa22.94■■□□□ 1.26
PCDHB11-202ENST00000624887 MAST2Q6P0Q8 1798 aa22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 KIF28PB7ZC32 967 aa22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 TXNRD3Q86VQ6 643 aa22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 ESR2Q92731 530 aa22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 ZKSCAN3Q9BRR0 538 aa22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 NOL7Q9UMY1 257 aaKnown RBP22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 BAZ2AQ9UIF9 1905 aaKnown RBP22.93■■□□□ 1.26
PCDHB11-202ENST00000624887 IFNAR1P17181 557 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 KRT40Q6A162 431 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 POTEAQ6S8J7 498 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 CCDC73Q6ZRK6 1079 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 STK11IPQ8N1F8 1099 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 KCNG4Q8TDN1 519 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 GOLPH3LQ9H4A5 285 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 PCDHA7Q9UN72 937 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 LEMD3Q9Y2U8 911 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 CCDC88AQ3V6T2 1871 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 SNW1Q13573 536 aaKnown RBP22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 ADALQ6DHV7 355 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 ENGASEQ8NFI3 743 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 FAM200AQ8TCP9 573 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 UBAC1Q9BSL1 405 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 CLIC4Q9Y696 253 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 DUOX1Q9NRD9 1551 aa22.92■■□□□ 1.26
PCDHB11-202ENST00000624887 CTAGE5O15320 804 aa22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 FMNL1O95466 1100 aaPredicted RBP22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 APBA3O96018 575 aa22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 PCP11498 1178 aaKnown RBP22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 FAM160A1Q05DH4 1040 aa22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 SSRP1Q08945 709 aaKnown RBP22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 CHAF1AQ13111 956 aaPredicted RBP22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 PRR5LQ6MZQ0 368 aa22.91■■□□□ 1.26
PCDHB11-202ENST00000624887 A0A1W2PQ27 194 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 A0A1W2PQ64 194 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 A0A1W2PQD8 194 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 FGRP09769 529 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 PRDX5P30044 214 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 STK38Q15208 465 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 RTN1Q16799 776 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 ANKIB1Q9P2G1 1089 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 GYS1P13807 737 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 MSNP26038 577 aaKnown RBP22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 SEC23AQ15436 765 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 CTR9Q6PD62 1173 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 SASS6Q6UVJ0 657 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 SLC26A6Q9BXS9 759 aa22.9■■□□□ 1.26
PCDHB11-202ENST00000624887 CCDC196A0A1B0GTZ2 297 aa22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 IGSF3O75054 1194 aa22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 ADCY5O95622 1261 aa22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 TRIM29Q14134 588 aa22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 FSIP1Q8NA03 581 aa22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 WASF1Q92558 559 aa22.89■■□□□ 1.26
PCDHB11-202ENST00000624887 SMIM22K7EJ46 135 aa22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 SPTLC2O15270 562 aa22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 ANO1Q5XXA6 986 aa22.89■■□□□ 1.25
PCDHB11-202ENST00000624887 ZNF654Q8IZM8 581 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms