RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TCHHQ07283 1943 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 ERICH2A1L162 156 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 BBOX1O75936 387 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 SRGNP10124 158 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 GNAT2P19087 354 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 KRT85P78386 507 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 WTAPQ15007 396 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 GIMAP6Q6P9H5 292 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 DPP8Q6V1X1 898 aaPredicted RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 C2CD5Q86YS7 1000 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 MPNDQ8N594 471 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 TDRD7Q8NHU6 1098 aaKnown RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 SMARCC2Q8TAQ2 1214 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 C8orf76Q96K31 380 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 BRIP1Q9BX63 1249 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 CRNKL1Q9BZJ0 848 aaKnown RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 SBF2Q86WG5 1849 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 LIG1P18858 919 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 ATP2B4P23634 1241 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 GUCY1A2P33402 732 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 ALX1Q15699 326 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 SYNE3Q6ZMZ3 975 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 RBSNQ9H1K0 784 aa4.02□□□□□ -1.77
LIG4-205ENST00000614526 TNRC6CQ9HCJ0 1690 aaKnown RBP4.02□□□□□ -1.77
LIG4-205ENST00000614526 RREB1Q92766 1687 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 TNKSO95271 1327 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 PTMSP20962 102 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 BTDP43251 543 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 PLCD1P51178 756 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 CACNB3P54284 484 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 PLCB2Q00722 1185 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 RESTQ13127 1097 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 GNL2Q13823 731 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 SART3Q15020 963 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 SLC15A2Q16348 729 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 WDR66Q8TBY9 1149 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 BICD2Q8TD16 824 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 ERCC4Q92889 916 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 USP28Q96RU2 1077 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 NOL10Q9BSC4 688 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 ALG1Q9BT22 464 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 KRT23Q9C075 422 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 TMX4Q9H1E5 349 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 KCNJ14Q9UNX9 436 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 PCDHAC2Q9Y5I4 1007 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 BAZ2BQ9UIF8 2168 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 A0A087WWV3 80 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 FSD2A1L4K1 749 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 TSPY2A6NKD2 308 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 SEMA3EO15041 775 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 DHX16O60231 1041 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 KCNA4P22459 653 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 IARSP41252 1262 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 RBM5P52756 815 aaKnown RBP eCLIP4.01□□□□□ -1.77
LIG4-205ENST00000614526 HMGN5P82970 282 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 SF3B2Q13435 895 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 L1TD1Q5T7N2 865 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 SPTY2D1Q68D10 685 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 PPP4R3CPQ6ZMV5 832 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 TICAM2Q86XR7 235 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 KIAA0825Q8IV33 1275 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 CKAP2LQ8IYA6 745 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 LEO1Q8WVC0 666 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 STAG1Q8WVM7 1258 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 ESR2Q92731 530 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 CNNM2Q9H8M5 875 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 MKNK2Q9HBH9 465 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 FAM217BQ9NTX9 383 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 STK32BQ9NY57 414 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 BCORQ6W2J9 1755 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 LRP5O75197 1615 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 TAF1LQ8IZX4 1826 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 IRS2Q9Y4H2 1338 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 USP17L3A6NCW0 530 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 USP17L4A6NCW7 530 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 KIF28PB7ZC32 967 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 H0YIN7 160 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 RGL2O15211 777 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 C21orf2O43822 256 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 MBD3O95983 291 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 NPR1P16066 1061 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 HOXA10P31260 410 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 PDE6BP35913 854 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 UBE2HP62256 183 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 RTN1Q16799 776 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 IFIT1BQ5T764 474 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 RASGRP2Q7LDG7 609 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 USP17L1Q7RTZ2 530 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 TEX11Q8IYF3 940 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 ENAHQ8N8S7 591 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 TMEM87BQ96K49 555 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 CRAMP1Q96RY5 1269 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 LLPHQ9BRT6 129 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 RNF41Q9H4P4 317 aaPredicted RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 TTF2Q9UNY4 1162 aaKnown RBP4.01□□□□□ -1.77
LIG4-205ENST00000614526 ATP6V0A2Q9Y487 856 aa4.01□□□□□ -1.77
LIG4-205ENST00000614526 SCN7AQ01118 1682 aa4□□□□□ -1.77
LIG4-205ENST00000614526 ZBTB7AO95365 584 aa4□□□□□ -1.77
LIG4-205ENST00000614526 MARCKSP29966 332 aaPredicted RBP4□□□□□ -1.77
LIG4-205ENST00000614526 ME1P48163 572 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms