RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 CCDC30Q5VVM6 783 aa9.48□□□□□ -0.89
FARP1-239ENST00000602171 TRMT2AQ8IZ69 625 aaKnown RBP9.48□□□□□ -0.89
FARP1-239ENST00000602171 ZNF295-AS1Q8N0V1 137 aa9.48□□□□□ -0.89
FARP1-239ENST00000602171 LINC00116Q8NCU8 138 aa9.48□□□□□ -0.89
FARP1-239ENST00000602171 STK31Q9BXU1 1019 aa9.48□□□□□ -0.89
FARP1-239ENST00000602171 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
FARP1-239ENST00000602171 LY75O60449 1722 aa9.48□□□□□ -0.89
FARP1-239ENST00000602171 A0A087WZG4 1122 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 SKIP12755 728 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 COL8A1P27658 744 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 SSFA2P28290 1259 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 IL6STP40189 918 aaPredicted RBP9.47□□□□□ -0.89
FARP1-239ENST00000602171 EXOSC9Q06265 439 aaKnown RBP9.47□□□□□ -0.89
FARP1-239ENST00000602171 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 GRIN2CQ14957 1233 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 C8orf58Q8NAV2 365 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 ZIC5Q96T25 663 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 DBF4Q9UBU7 674 aaPredicted RBP9.47□□□□□ -0.89
FARP1-239ENST00000602171 COG6Q9Y2V7 657 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 USP16Q9Y5T5 823 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 KDM3BQ7LBC6 1761 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 UBR2Q8IWV8 1755 aa9.47□□□□□ -0.89
FARP1-239ENST00000602171 ELL2O00472 640 aaPredicted RBP9.46□□□□□ -0.9
FARP1-239ENST00000602171 KHNYNO15037 678 aaKnown RBP9.46□□□□□ -0.9
FARP1-239ENST00000602171 RPS6KA4O75676 772 aa9.46□□□□□ -0.9
FARP1-239ENST00000602171 HOXB4P17483 251 aaPredicted RBP9.46□□□□□ -0.9
FARP1-239ENST00000602171 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.9
FARP1-239ENST00000602171 BICDL1Q6ZP65 573 aa9.46□□□□□ -0.9
FARP1-239ENST00000602171 ALG2Q9H553 416 aa9.46□□□□□ -0.9
FARP1-239ENST00000602171 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
FARP1-239ENST00000602171 DCDC2BA2VCK2 349 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 PRAMEF22A3QJZ6 481 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 VAMP4O75379 141 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
FARP1-239ENST00000602171 DGKGP49619 791 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 GTF2IP78347 998 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 KRT24Q2M2I5 525 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 INTS5Q6P9B9 1019 aaKnown RBP9.45□□□□□ -0.9
FARP1-239ENST00000602171 TSPYL6Q8N831 410 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 DDX21Q9NR30 783 aaKnown RBP eCLIP9.45□□□□□ -0.9
FARP1-239ENST00000602171 HYPKQ9NX55 129 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 SCHIP1Q9P0W5 487 aaPredicted RBP9.45□□□□□ -0.9
FARP1-239ENST00000602171 PRR12Q9ULL5 1215 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 ZBTB1Q9Y2K1 713 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 GPC6Q9Y625 555 aaPredicted RBP9.45□□□□□ -0.9
FARP1-239ENST00000602171 C5P01031 1676 aa9.45□□□□□ -0.9
FARP1-239ENST00000602171 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
FARP1-239ENST00000602171 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 RAD21O60216 631 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 A1BGP04217 495 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 CD33P20138 364 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 RFC4P35249 363 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 EIF5P55010 431 aaKnown RBP9.44□□□□□ -0.9
FARP1-239ENST00000602171 ZNF827Q17R98 1081 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 ALDH1L2Q3SY69 923 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 ZNF468Q5VIY5 522 aaPredicted RBP9.44□□□□□ -0.9
FARP1-239ENST00000602171 CHSY3Q70JA7 882 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 MARK1Q9P0L2 795 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 RREB1Q92766 1687 aa9.44□□□□□ -0.9
FARP1-239ENST00000602171 C4BP0C0L5 1744 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 DDX58O95786 925 aaKnown RBP9.43□□□□□ -0.9
FARP1-239ENST00000602171 MYL6BP14649 208 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 TEAD4Q15561 434 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 KIF6Q6ZMV9 814 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 ARXQ96QS3 562 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 NEUROD4Q9HD90 331 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 CHPF2Q9P2E5 772 aa9.43□□□□□ -0.9
FARP1-239ENST00000602171 COL15A1P39059 1388 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 NCOA4Q13772 614 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 R3HDM1Q15032 1099 aaKnown RBP9.42□□□□□ -0.9
FARP1-239ENST00000602171 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 ZNF358Q9NW07 568 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 ZNF652Q9Y2D9 606 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 TJP1Q07157 1748 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
FARP1-239ENST00000602171 PNPLA7Q6ZV29 1317 aa9.41□□□□□ -0.9
FARP1-239ENST00000602171 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
FARP1-239ENST00000602171 CLEC4GQ6UXB4 293 aa9.41□□□□□ -0.9
FARP1-239ENST00000602171 NARFQ9UHQ1 456 aa9.41□□□□□ -0.9
FARP1-239ENST00000602171 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
FARP1-239ENST00000602171 COL5A3P25940 1745 aaPredicted RBP9.41□□□□□ -0.9
FARP1-239ENST00000602171 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 USP42Q9H9J4 1324 aaKnown RBP9.4□□□□□ -0.9
FARP1-239ENST00000602171 EFSO43281 561 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 ALAS2P22557 587 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 NOS2P35228 1153 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 AIMP1Q12904 312 aaKnown RBP9.4□□□□□ -0.9
FARP1-239ENST00000602171 HSP90AB3PQ58FF7 597 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 COPS6Q7L5N1 327 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 FCHSD1Q86WN1 690 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 COL23A1Q86Y22 540 aaPredicted RBP9.4□□□□□ -0.9
FARP1-239ENST00000602171 NLGN1Q8N2Q7 840 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.4□□□□□ -0.9
FARP1-239ENST00000602171 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 KLF15Q9UIH9 416 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 GTF3C3Q9Y5Q9 886 aa9.4□□□□□ -0.9
FARP1-239ENST00000602171 TAF1LQ8IZX4 1826 aa9.4□□□□□ -0.91
FARP1-239ENST00000602171 PTPRCP08575 1304 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms