RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SRGAP3O43295 1099 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 CYP2C8P10632 490 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 GRK4P32298 578 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 MOGSQ13724 837 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 MTFR1Q15390 333 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 ERICH6Q7L0X2 663 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 FASTKD5Q7L8L6 764 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 XAGE2Q96GT9 111 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 NEUROD6Q96NK8 337 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 BRCA2P51587 3418 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 GAKO14976 1311 aa13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.32
CHMP2A-202ENST00000596708 DDTLA6NHG4 134 aaPredicted RBP13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 PHF20L1A8MW92 1017 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 GNAI3P08754 354 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 PTPRAP18433 802 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 BTDP43251 543 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 FCGRTP55899 365 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 TFCP2Q12800 502 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 GPAT2Q6NUI2 795 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 ADGRA2Q96PE1 1338 aa13.07□□□□□ -0.32
CHMP2A-202ENST00000596708 ZBTB22O15209 634 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 SLURP2P0DP57 97 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 BCRP11274 1271 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 UBXN2AP68543 259 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 MVPQ14764 893 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 GORABQ5T7V8 394 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 NKX2-3Q8TAU0 364 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 ARHGAP45Q92619 1136 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 DDX4Q9NQI0 724 aaKnown RBP13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 AFG3L2Q9Y4W6 797 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 CEP290O15078 2479 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 MROH7-TTC4A0A0A0MT08 1334 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 CDK5RAP2Q96SN8 1893 aa13.06□□□□□ -0.32
CHMP2A-202ENST00000596708 A0A0G2JLL6 359 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 CTNND1O60716 968 aaKnown RBP13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 MECOMQ03112 1051 aa13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 PRKCZQ05513 592 aa13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 PRRT2Q7Z6L0 340 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 DPF3Q92784 378 aa13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 RNF208Q9H0X6 261 aa13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 PDS5AQ29RF7 1337 aaKnown RBP13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 ATRNL1Q5VV63 1379 aa13.05□□□□□ -0.32
CHMP2A-202ENST00000596708 GPR75-ASB3A0A0A6YYF3 556 aa13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 LDHCP07864 332 aa13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 CCL5P13501 91 aa13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 MAP3K10Q02779 954 aa13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 G3BP1Q13283 466 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 SMCR8Q8TEV9 937 aaPredicted RBP13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 GABRQQ9UN88 632 aa13.04□□□□□ -0.32
CHMP2A-202ENST00000596708 H0YGN5 161 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 IPO8O15397 1037 aaKnown RBP13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 GJB1P08034 283 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 GSTO1P78417 241 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 TBC1D9Q6ZT07 1266 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 CCDC84Q86UT8 332 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 SPATA5Q8NB90 893 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 SHISA4Q96DD7 197 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 HMG20BQ9P0W2 317 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
CHMP2A-202ENST00000596708 MYH1P12882 1939 aa13.02□□□□□ -0.32
CHMP2A-202ENST00000596708 FAM196BA6NMK8 535 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 TNPO2O14787 897 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 ADCY3O60266 1144 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 TBC1D12O60347 775 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 GNAI2P04899 355 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 GJA8P48165 433 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 FXR1P51114 621 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 RHBDL3P58872 404 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 MTX1Q13505 466 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 PI16Q6UXB8 463 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 SLAIN1Q8ND83 568 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 NSUN4Q96CB9 384 aaKnown RBP13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 HTATIP2Q9BUP3 242 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 FOCADQ5VW36 1801 aa13.02□□□□□ -0.33
CHMP2A-202ENST00000596708 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 FLT3LGP49771 235 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 ANKRD13CQ8N6S4 541 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 ZNF384Q8TF68 577 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 CLUAP1Q96AJ1 413 aa13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
CHMP2A-202ENST00000596708 OSBPL5Q9H0X9 879 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms