RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SH2B2O14492 632 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 TERF2Q15554 542 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 RRP12Q5JTH9 1297 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 TACC3Q9Y6A5 838 aa19.82■□□□□ 0.76
SHKBP1-205ENST00000594973 ZMYM6O95789 1325 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 OTUD7BQ6GQQ9 843 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 CNBD1Q8NA66 436 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 LY75O60449 1722 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 MAGEB6P1A0A0J9YX57 407 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 NFXL1Q6ZNB6 911 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 CCDC144CPQ8IYA2 1237 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 ANKRD2Q9GZV1 360 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 TAOK2Q9UL54 1235 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 JAG2Q9Y219 1238 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 TAF1LQ8IZX4 1826 aa19.81■□□□□ 0.76
SHKBP1-205ENST00000594973 SBF2Q86WG5 1849 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 AKNAD1Q5T1N1 836 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 GIMAP6Q6P9H5 292 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 MFSD6Q6ZSS7 791 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 FBXO33Q7Z6M2 555 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 MICU3Q86XE3 530 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 FTOQ9C0B1 505 aaKnown RBP eCLIP19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 ZSWIM5Q9P217 1185 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 COL24A1Q17RW2 1714 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 LIG1P18858 919 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 HIBADHP31937 336 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 ADD1P35611 737 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 FUCA2Q9BTY2 467 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 ORC3Q9UBD5 711 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 PAXBP1Q9Y5B6 917 aa19.8■□□□□ 0.76
SHKBP1-205ENST00000594973 TRIM37O94972 964 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 TXNRD3Q86VQ6 643 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 IGDCC4Q8TDY8 1250 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 MYL10Q9BUA6 226 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 CALCOCO1Q9P1Z2 691 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 MINDY4BA8MYZ0 360 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 DYNLL1P63167 89 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 KRT222Q8N1A0 295 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 KIF18AQ8NI77 898 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 ZKSCAN3Q9BRR0 538 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 GJB4Q9NTQ9 266 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 ANKIB1Q9P2G1 1089 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 CFAP45Q9UL16 551 aa19.79■□□□□ 0.76
SHKBP1-205ENST00000594973 A0A1B0GUL6 1792 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 IFIT3O14879 490 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 APOA5Q6Q788 366 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 ZNF384Q8TF68 577 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 C8orf76Q96K31 380 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 TMEM87BQ96K49 555 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 LY9Q9HBG7 655 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 C4AP0C0L4 1744 aa19.78■□□□□ 0.76
SHKBP1-205ENST00000594973 VGLL3A8MV65 326 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 CAMK4Q16566 473 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 CNNM2Q9H8M5 875 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 ZBTB22O15209 634 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 PGBD1Q96JS3 809 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 RIOK1Q9BRS2 568 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 KRT23Q9C075 422 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 TSPYL1Q9H0U9 437 aa19.77■□□□□ 0.76
SHKBP1-205ENST00000594973 SMIM22K7EJ46 135 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 TULP2O00295 520 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 ZBTB43O43298 467 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 PPARAQ07869 468 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 PRR5LQ6MZQ0 368 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 KRT27Q7Z3Y8 459 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 BICD2Q8TD16 824 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 CDC27P30260 824 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 ILDR1Q86SU0 546 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 STAG1Q8WVM7 1258 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 DACT1Q9NYF0 836 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 FAM53CQ9NYF3 392 aa19.76■□□□□ 0.75
SHKBP1-205ENST00000594973 SEMA3EO15041 775 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 GYS1P13807 737 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 ADRA2BP18089 450 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 MECOMQ03112 1051 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 PHKBQ93100 1093 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 USP28Q96RU2 1077 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 SLC12A7Q9Y666 1083 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 CCDC69A6NI79 296 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 PRDX5P30044 214 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 GRAPQ13588 217 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 GRAPLQ8TC17 118 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 NSUN4Q96CB9 384 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 AIFM3Q96NN9 605 aa19.75■□□□□ 0.75
SHKBP1-205ENST00000594973 CYP2D7A0A087X1C5 515 aa19.74■□□□□ 0.75
SHKBP1-205ENST00000594973 GOLGA8AA7E2F4 631 aa19.74■□□□□ 0.75
SHKBP1-205ENST00000594973 POLR3DP05423 398 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-205ENST00000594973 FBXO18Q8NFZ0 1043 aa19.74■□□□□ 0.75
SHKBP1-205ENST00000594973 SGMS1Q86VZ5 419 aa19.74■□□□□ 0.75
SHKBP1-205ENST00000594973 NUP62CLQ9H1M0 184 aa19.74■□□□□ 0.75
SHKBP1-205ENST00000594973 AP5Z1O43299 807 aa19.73■□□□□ 0.75
SHKBP1-205ENST00000594973 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-205ENST00000594973 ZNF396Q96N95 335 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-205ENST00000594973 GPR101Q96P66 508 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-205ENST00000594973 RNF41Q9H4P4 317 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-205ENST00000594973 AATFQ9NY61 560 aaKnown RBP eCLIP19.73■□□□□ 0.75
SHKBP1-205ENST00000594973 CACNA1SQ13698 1873 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms