RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 GNAI3P08754 354 aa21.69■■□□□ 1.06
SHKBP1-203ENST00000594298 HOXD10P28358 340 aa21.69■■□□□ 1.06
SHKBP1-203ENST00000594298 TRIM47Q96LD4 638 aa21.69■■□□□ 1.06
SHKBP1-203ENST00000594298 PARK7Q99497 189 aaKnown RBP21.69■■□□□ 1.06
SHKBP1-203ENST00000594298 AKAP2Q9Y2D5 859 aa21.69■■□□□ 1.06
SHKBP1-203ENST00000594298 A0A1B0GUL7 405 aa21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 SPTY2D1Q68D10 685 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 GPAT2Q6NUI2 795 aa21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 SH3BP5LQ7L8J4 393 aa21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 XAGE2Q96GT9 111 aa21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 ABCF2Q9UG63 623 aa21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 KIAA0100Q14667 2235 aaKnown RBP21.68■■□□□ 1.06
SHKBP1-203ENST00000594298 ZSWIM8A7E2V4 1837 aa21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 A0A0G2JLL6 359 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 SRGAP3O43295 1099 aa21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 PTPRAP18433 802 aa21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 OSBPP22059 807 aa21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 MVPQ14764 893 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 FASTKD5Q7L8L6 764 aaKnown RBP21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 PRRT2Q7Z6L0 340 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 PICK1Q9NRD5 415 aa21.67■■□□□ 1.06
SHKBP1-203ENST00000594298 MROH7-TTC4A0A0A0MT08 1334 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 FMNL1O95466 1100 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 MYCP01106 439 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 BCRP11274 1271 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 MS4A1P11836 297 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 TFCP2Q12800 502 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 ZSCAN29Q8IWY8 852 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 FTSJ3Q8IY81 847 aaKnown RBP21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 SLC45A1Q9Y2W3 748 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 AFG3L2Q9Y4W6 797 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 ZHX2Q9Y6X8 837 aa21.66■■□□□ 1.06
SHKBP1-203ENST00000594298 GPR75-ASB3A0A0A6YYF3 556 aa21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 DDTLA6NHG4 134 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 CTNND1O60716 968 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 NPM3O75607 178 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 BTDP43251 543 aa21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 RAET1EQ8TD07 263 aa21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 DDX4Q9NQI0 724 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-203ENST00000594298 MYPNQ86TC9 1320 aa21.64■■□□□ 1.05
SHKBP1-203ENST00000594298 CYP2C8P10632 490 aa21.64■■□□□ 1.05
SHKBP1-203ENST00000594298 GRK4P32298 578 aa21.64■■□□□ 1.05
SHKBP1-203ENST00000594298 ERICH6Q7L0X2 663 aa21.64■■□□□ 1.05
SHKBP1-203ENST00000594298 RCAN3Q9UKA8 241 aa21.64■■□□□ 1.05
SHKBP1-203ENST00000594298 TBC1D12O60347 775 aa21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 ECM2O94769 699 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 MAP4K4O95819 1239 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 FCGRTP55899 365 aa21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 RHBDL3P58872 404 aa21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 MECOMQ03112 1051 aa21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 MTFR1Q15390 333 aa21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 ZNF384Q8TF68 577 aa21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.63■■□□□ 1.05
SHKBP1-203ENST00000594298 DOCK2Q92608 1830 aa21.62■■□□□ 1.05
SHKBP1-203ENST00000594298 PICALMQ13492 652 aa21.62■■□□□ 1.05
SHKBP1-203ENST00000594298 NKX2-3Q8TAU0 364 aa21.62■■□□□ 1.05
SHKBP1-203ENST00000594298 SHISA4Q96DD7 197 aa21.62■■□□□ 1.05
SHKBP1-203ENST00000594298 HMG20BQ9P0W2 317 aa21.62■■□□□ 1.05
SHKBP1-203ENST00000594298 MYH2Q9UKX2 1941 aa21.61■■□□□ 1.05
SHKBP1-203ENST00000594298 PRKCZQ05513 592 aa21.61■■□□□ 1.05
SHKBP1-203ENST00000594298 TMEM57Q8N5G2 664 aa21.61■■□□□ 1.05
SHKBP1-203ENST00000594298 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
SHKBP1-203ENST00000594298 TNNQ9UQP3 1299 aa21.61■■□□□ 1.05
SHKBP1-203ENST00000594298 GNAI2P04899 355 aa21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 ARID4AP29374 1257 aaPredicted RBP21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 GJA8P48165 433 aa21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 GSTO1P78417 241 aa21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 SPATA5Q8NB90 893 aa21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 NSUN4Q96CB9 384 aaKnown RBP21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 NEUROD6Q96NK8 337 aa21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 AK9Q5TCS8 1911 aa21.6■■□□□ 1.05
SHKBP1-203ENST00000594298 COL2A1P02458 1487 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-203ENST00000594298 LDHCP07864 332 aa21.59■■□□□ 1.05
SHKBP1-203ENST00000594298 GJB1P08034 283 aa21.59■■□□□ 1.05
SHKBP1-203ENST00000594298 SLURP2P0DP57 97 aa21.59■■□□□ 1.05
SHKBP1-203ENST00000594298 GADL1Q6ZQY3 521 aa21.59■■□□□ 1.05
SHKBP1-203ENST00000594298 SLAIN1Q8ND83 568 aa21.59■■□□□ 1.05
SHKBP1-203ENST00000594298 TRIM75PA6NK02 468 aa21.58■■□□□ 1.05
SHKBP1-203ENST00000594298 CCL5P13501 91 aa21.58■■□□□ 1.05
SHKBP1-203ENST00000594298 UBXN2AP68543 259 aa21.58■■□□□ 1.05
SHKBP1-203ENST00000594298 UBE2Q1Q7Z7E8 422 aa21.58■■□□□ 1.05
SHKBP1-203ENST00000594298 OSBPL5Q9H0X9 879 aaPredicted RBP21.58■■□□□ 1.05
SHKBP1-203ENST00000594298 AGTPBP1Q9UPW5 1226 aa21.58■■□□□ 1.05
SHKBP1-203ENST00000594298 GORABQ5T7V8 394 aa21.57■■□□□ 1.04
SHKBP1-203ENST00000594298 PI16Q6UXB8 463 aa21.57■■□□□ 1.04
SHKBP1-203ENST00000594298 ITPRIPQ8IWB1 547 aa21.57■■□□□ 1.04
SHKBP1-203ENST00000594298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.57■■□□□ 1.04
SHKBP1-203ENST00000594298 GABRQQ9UN88 632 aa21.57■■□□□ 1.04
SHKBP1-203ENST00000594298 COLQQ9Y215 455 aaPredicted RBP21.57■■□□□ 1.04
SHKBP1-203ENST00000594298 PNMA6EA0A0J9YXQ4 647 aa21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 H0YGN5 161 aa21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 UQCRFS1P1P0C7P4 283 aa21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 FXR1P51114 621 aaKnown RBP eCLIP21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 G3BP1Q13283 466 aaKnown RBP eCLIP21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 TBC1D9Q6ZT07 1266 aa21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 SMCR8Q8TEV9 937 aaPredicted RBP21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 TBC1D2Q9BYX2 928 aa21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 RNF208Q9H0X6 261 aa21.56■■□□□ 1.04
SHKBP1-203ENST00000594298 DOCK1Q14185 1865 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms