RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 DOCK2Q92608 1830 aa10.97□□□□□ -0.65
SMAD4-215ENST00000592911 UTYO14607 1347 aa10.96□□□□□ -0.65
SMAD4-215ENST00000592911 GYG1P46976 350 aa10.96□□□□□ -0.65
SMAD4-215ENST00000592911 MOGSQ13724 837 aa10.96□□□□□ -0.65
SMAD4-215ENST00000592911 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-215ENST00000592911 WDR66Q8TBY9 1149 aa10.96□□□□□ -0.65
SMAD4-215ENST00000592911 TSR2Q969E8 191 aaKnown RBP10.96□□□□□ -0.65
SMAD4-215ENST00000592911 ZKSCAN4Q969J2 545 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-215ENST00000592911 BIN2Q9UBW5 565 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-215ENST00000592911 CPA4Q9UI42 421 aa10.96□□□□□ -0.65
SMAD4-215ENST00000592911 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.65
SMAD4-215ENST00000592911 ADCY3O60266 1144 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 VAMP4O75379 141 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 FRAT2O75474 233 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-215ENST00000592911 CTGFP29279 349 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 PRKCZQ05513 592 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 RABL6Q3YEC7 729 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-215ENST00000592911 NECAB2Q7Z6G3 386 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 WDR63Q8IWG1 891 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 C9orf78Q9NZ63 289 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-215ENST00000592911 JAG2Q9Y219 1238 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 DOCK1Q14185 1865 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
SMAD4-215ENST00000592911 A0A0G2JLL6 359 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-215ENST00000592911 PDE8BO95263 885 aa10.94□□□□□ -0.66
SMAD4-215ENST00000592911 MYCP01106 439 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-215ENST00000592911 PRRT2Q7Z6L0 340 aaPredicted RBP10.94□□□□□ -0.66
SMAD4-215ENST00000592911 VGLL2Q8N8G2 317 aa10.94□□□□□ -0.66
SMAD4-215ENST00000592911 GDF15Q99988 308 aa10.94□□□□□ -0.66
SMAD4-215ENST00000592911 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
SMAD4-215ENST00000592911 MYH2Q9UKX2 1941 aa10.94□□□□□ -0.66
SMAD4-215ENST00000592911 FANCIQ9NVI1 1328 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 PLIN1O60240 522 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 INHAP05111 366 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 IFIT1P09914 478 aaKnown RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 INPP5BP32019 993 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 PSEN1P49768 467 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 MAP3K10Q02779 954 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 PUM3Q15397 648 aaKnown RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 COA7Q96BR5 231 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 ZFP91Q96JP5 570 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-215ENST00000592911 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
SMAD4-215ENST00000592911 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 TNPO2O14787 897 aaKnown RBP10.92□□□□□ -0.66
SMAD4-215ENST00000592911 SEMA3EO15041 775 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 ENTPD3O75355 529 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 TFRCP02786 760 aaKnown RBP10.92□□□□□ -0.66
SMAD4-215ENST00000592911 FLT3LGP49771 235 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 FAM110CQ1W6H9 321 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 METTL24Q5JXM2 366 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 EPHA10Q5JZY3 1008 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 GPAT2Q6NUI2 795 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 SCYL3Q8IZE3 742 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 PICK1Q9NRD5 415 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 LOC285556D6RIA3 1793 aa10.92□□□□□ -0.66
SMAD4-215ENST00000592911 ATRNL1Q5VV63 1379 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 CTNND1O60716 968 aaKnown RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 MAP4K4O95819 1239 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 HMGCRP04035 888 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 FGFR2P21802 821 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 GCLCP48506 637 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 CACNB3P54284 484 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 CHAF1AQ13111 956 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 FAM109BQ6ICB4 259 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 PROCA1Q8NCQ7 364 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-215ENST00000592911 IDI2Q9BXS1 227 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 AFG3L2Q9Y4W6 797 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 UNC80Q8N2C7 3258 aa10.91□□□□□ -0.66
SMAD4-215ENST00000592911 RPTORQ8N122 1335 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 PHF20L1A8MW92 1017 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 SOX1O00570 391 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-215ENST00000592911 PTPRAP18433 802 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 BCAMP50895 628 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 PABPC4Q13310 644 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMAD4-215ENST00000592911 GRIK5Q16478 980 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 MIGA2Q7L4E1 593 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
SMAD4-215ENST00000592911 TDHQ8IZJ6 230 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 SMCR8Q8TEV9 937 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-215ENST00000592911 LPIN2Q92539 896 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 DEFB118Q96PH6 123 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 NBPF3Q9H094 633 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 STAP2Q9UGK3 403 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 AGTPBP1Q9UPW5 1226 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 DAGLAQ9Y4D2 1042 aa10.9□□□□□ -0.66
SMAD4-215ENST00000592911 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
SMAD4-215ENST00000592911 PDS5AQ29RF7 1337 aaKnown RBP10.89□□□□□ -0.67
SMAD4-215ENST00000592911 COL2A1P02458 1487 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-215ENST00000592911 F6X3S4 739 aa10.89□□□□□ -0.67
SMAD4-215ENST00000592911 TBC1D12O60347 775 aa10.89□□□□□ -0.67
SMAD4-215ENST00000592911 CYP2C8P10632 490 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms