RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 IFIT3O14879 490 aaKnown RBP17.57■□□□□ 0.4
SAFB-205ENST00000588852 TOB1P50616 345 aaPredicted RBP17.57■□□□□ 0.4
SAFB-205ENST00000588852 NR5A1Q13285 461 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 ZBTB9Q96C00 473 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 STRBPQ96SI9 672 aaKnown RBP17.57■□□□□ 0.4
SAFB-205ENST00000588852 TRMT112Q9UI30 125 aaKnown RBP17.57■□□□□ 0.4
SAFB-205ENST00000588852 TPM4P67936 248 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 MYL5Q02045 173 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 RESP18Q5W5W9 173 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 MAGEB6Q8N7X4 407 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 AKAP11Q9UKA4 1901 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 hCG_1642624A0A1W2PR95 340 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 TCRBV5S4A2TA0A5A2 114 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 PDE8BO95263 885 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 FMR1Q06787 632 aaKnown RBP eCLIP17.57■□□□□ 0.41e-6■■□□□ 12.4
SAFB-205ENST00000588852 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
SAFB-205ENST00000588852 IQSEC3Q9UPP2 1182 aaPredicted RBP17.57■□□□□ 0.4
SAFB-205ENST00000588852 C4AP0C0L4 1744 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 MBD4O95243 580 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 SLFN14P0C7P3 912 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 ADKP55263 362 aaKnown RBP17.56■□□□□ 0.4
SAFB-205ENST00000588852 CTSWP56202 376 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 EVA1CP58658 441 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 GIGYF2Q6Y7W6 1299 aaKnown RBP17.56■□□□□ 0.4
SAFB-205ENST00000588852 L2HGDHQ9H9P8 463 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 HSPA2P54652 639 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 NKX1-1Q15270 411 aaPredicted RBP17.56■□□□□ 0.4
SAFB-205ENST00000588852 TRIM65Q6PJ69 517 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 KRBA2Q6ZNG9 492 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 BRINP3Q76B58 766 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 KCND1Q9NSA2 647 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 SLC12A7Q9Y666 1083 aa17.56■□□□□ 0.4
SAFB-205ENST00000588852 IKBKBO14920 756 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 CASP1P29466 404 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 ARHGAP29Q52LW3 1261 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 IFNL3Q8IZI9 196 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 MIGA1Q8NAN2 632 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 OXER1Q8TDS5 423 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
SAFB-205ENST00000588852 POLR2DO15514 142 aaKnown RBP17.55■□□□□ 0.4
SAFB-205ENST00000588852 PPP6R2O75170 966 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
SAFB-205ENST00000588852 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
SAFB-205ENST00000588852 TRIM29Q14134 588 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 ZBTB1Q9Y2K1 713 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.55■□□□□ 0.43e-8■■■■□ 21.4
SAFB-205ENST00000588852 MAP3K15Q6ZN16 1313 aa17.55■□□□□ 0.4
SAFB-205ENST00000588852 FAM205CA6NFA0 338 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 TOP1P11387 765 aaKnown RBP17.54■□□□□ 0.4
SAFB-205ENST00000588852 ETF1P62495 437 aaKnown RBP17.54■□□□□ 0.4
SAFB-205ENST00000588852 REXO1L1PQ8IX06 675 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 MED15Q96RN5 788 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 NAPBQ9H115 298 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 SERTAD1Q9UHV2 236 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 WTIPA6NIX2 430 aaPredicted RBP17.54■□□□□ 0.4
SAFB-205ENST00000588852 CLCN6P51797 869 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 RASGRF1Q13972 1273 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 TICAM2Q86XR7 235 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
SAFB-205ENST00000588852 PLA2G12BQ9BX93 195 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
SAFB-205ENST00000588852 COBLO75128 1261 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 UBE3CQ15386 1083 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 VSTM4Q8IW00 320 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 KRT222Q8N1A0 295 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 NUP133Q8WUM0 1156 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 TIGD1Q96MW7 591 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 CDKL5O76039 1030 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 MDM2Q00987 491 aaPredicted RBP17.53■□□□□ 0.4
SAFB-205ENST00000588852 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
SAFB-205ENST00000588852 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
SAFB-205ENST00000588852 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 DESI2Q9BSY9 194 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 SAMSN1Q9NSI8 373 aaKnown RBP17.53■□□□□ 0.4
SAFB-205ENST00000588852 UBR2Q8IWV8 1755 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 TMEM139Q8IV31 216 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 LCORLQ8N3X6 602 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 CARD6Q9BX69 1037 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 MAN1B1Q9UKM7 699 aa17.53■□□□□ 0.4
SAFB-205ENST00000588852 TOGARAM2Q6ZUX3 1019 aa17.52■□□□□ 0.4
SAFB-205ENST00000588852 JMYQ8N9B5 988 aa17.52■□□□□ 0.4
SAFB-205ENST00000588852 WDR24Q96S15 920 aa17.52■□□□□ 0.4
SAFB-205ENST00000588852 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.4
SAFB-205ENST00000588852 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
SAFB-205ENST00000588852 NFE2L3Q9Y4A8 694 aa17.52■□□□□ 0.4
SAFB-205ENST00000588852 STRCP1A6NGW2 1772 aa17.52■□□□□ 0.4
SAFB-205ENST00000588852 COL5A2P05997 1499 aaPredicted RBP17.52■□□□□ 0.39
SAFB-205ENST00000588852 A0A0G2JS52 829 aa17.52■□□□□ 0.39
SAFB-205ENST00000588852 A0A0U1RQJ8 604 aa17.52■□□□□ 0.39
SAFB-205ENST00000588852 GSG1L2A8MUP6 293 aa17.52■□□□□ 0.39
SAFB-205ENST00000588852 SEC31AO94979 1220 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms