RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	DDX4	Q9NQI0	724 aa	Known RBP	18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	AKAP2	Q9Y2D5	859 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	MROH7-TTC4	A0A0A0MT08	1334 aa		18.74	■□□□□ 0.59
SREBF1-222	ENST00000583732	DDTL	A6NHG4	134 aa	Predicted RBP	18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	FMNL1	O95466	1100 aa	Predicted RBP	18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	CYP2C8	P10632	490 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	GADL1	Q6ZQY3	521 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	ERICH6	Q7L0X2	663 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	SLF2	Q8IX21	1173 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	SCYL3	Q8IZE3	742 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	ARHGAP45	Q92619	1136 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	TRIM47	Q96LD4	638 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	PARK7	Q99497	189 aa	Known RBP	18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	PICK1	Q9NRD5	415 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	ZHX2	Q9Y6X8	837 aa		18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	PDS5A	Q29RF7	1337 aa	Known RBP	18.73	■□□□□ 0.59
SREBF1-222	ENST00000583732	ATAD5	Q96QE3	1844 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	PHF20L1	A8MW92	1017 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	CCER2	I3L3R5	266 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	OSBP	P22059	807 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	MECOM	Q03112	1051 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	GORAB	Q5T7V8	394 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	GPAT2	Q6NUI2	795 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	PI16	Q6UXB8	463 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	CLUAP1	Q96AJ1	413 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	GCC1	Q96CN9	775 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	MYPN	Q86TC9	1320 aa		18.72	■□□□□ 0.59
SREBF1-222	ENST00000583732	CXCL11	O14625	94 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	BCAR3	O75815	825 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	GNRH1	P01148	92 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	TRIM27	P14373	513 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	PTPRA	P18433	802 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	PRMT2	P55345	433 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	MTX1	Q13505	466 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	MTFR1	Q15390	333 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	CCDC84	Q86UT8	332 aa	Predicted RBP	18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	RAET1E	Q8TD07	263 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	HMG20B	Q9P0W2	317 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732	SRRD	Q9UH36	339 aa		18.71	■□□□□ 0.59
SREBF1-222	ENST00000583732		A0A0G2JLL6	359 aa	Predicted RBP	18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	FAM196B	A6NMK8	535 aa		18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	GNAI2	P04899	355 aa		18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	TBC1D9	Q6ZT07	1266 aa		18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	ZNF384	Q8TF68	577 aa		18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	MAST2	Q6P0Q8	1798 aa		18.7	■□□□□ 0.58
SREBF1-222	ENST00000583732	PNMA6E	A0A0J9YXQ4	647 aa		18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	ZBTB22	O15209	634 aa		18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	IPO8	O15397	1037 aa	Known RBP	18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	ATF7IP	Q6VMQ6	1270 aa		18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	SPATA5	Q8NB90	893 aa		18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	FAM163A	Q96GL9	167 aa	Predicted RBP	18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	RAI14	Q9P0K7	980 aa		18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	PCDH10	Q9P2E7	1040 aa		18.69	■□□□□ 0.58
SREBF1-222	ENST00000583732	GPR75-ASB3	A0A0A6YYF3	556 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	TRIM75P	A6NK02	468 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	BCR	P11274	1271 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	HOXD10	P28358	340 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	GRK4	P32298	578 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	RHBDL3	P58872	404 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	PRKCZ	Q05513	592 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	HABP4	Q5JVS0	413 aa	Known RBP	18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	FASTKD5	Q7L8L6	764 aa	Known RBP	18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	AFG3L2	Q9Y4W6	797 aa		18.68	■□□□□ 0.58
SREBF1-222	ENST00000583732	FCGRT	P55899	365 aa		18.67	■□□□□ 0.58
SREBF1-222	ENST00000583732	NSUN4	Q96CB9	384 aa	Known RBP	18.67	■□□□□ 0.58
SREBF1-222	ENST00000583732	BIN2	Q9UBW5	565 aa	Predicted RBP	18.67	■□□□□ 0.58
SREBF1-222	ENST00000583732	CTNND1	O60716	968 aa	Known RBP	18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	ARID4A	P29374	1257 aa	Predicted RBP	18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	MCAM	P43121	646 aa		18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	GSTO1	P78417	241 aa		18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	MAP3K10	Q02779	954 aa		18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	TMEM57	Q8N5G2	664 aa		18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	SHISA4	Q96DD7	197 aa		18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	GABRQ	Q9UN88	632 aa		18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.66	■□□□□ 0.58
SREBF1-222	ENST00000583732	LOC285556	D6RIA3	1793 aa		18.65	■□□□□ 0.58
SREBF1-222	ENST00000583732	CDK5RAP2	Q96SN8	1893 aa		18.65	■□□□□ 0.58
SREBF1-222	ENST00000583732	LDHC	P07864	332 aa		18.65	■□□□□ 0.58
SREBF1-222	ENST00000583732	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.65	■□□□□ 0.58
SREBF1-222	ENST00000583732	SNRK	Q9NRH2	765 aa		18.65	■□□□□ 0.58
SREBF1-222	ENST00000583732	SIPA1L1	O43166	1804 aa		18.65	■□□□□ 0.58
SREBF1-222	ENST00000583732	CCL5	P13501	91 aa		18.64	■□□□□ 0.57
SREBF1-222	ENST00000583732	OS9	Q13438	667 aa	Predicted RBP	18.64	■□□□□ 0.57
SREBF1-222	ENST00000583732	TEX11	Q8IYF3	940 aa		18.64	■□□□□ 0.57
SREBF1-222	ENST00000583732	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.64	■□□□□ 0.57
SREBF1-222	ENST00000583732	C1orf115	Q9H7X2	142 aa		18.64	■□□□□ 0.57
SREBF1-222	ENST00000583732	LRP2BP	Q9P2M1	347 aa		18.64	■□□□□ 0.57
SREBF1-222	ENST00000583732	UQCRFS1P1	P0C7P4	283 aa		18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	UBXN2A	P68543	259 aa		18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	TTC39A	Q5SRH9	613 aa		18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	TREML2	Q5T2D2	321 aa		18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	ZKSCAN2	Q63HK3	967 aa		18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	NOL10	Q9BSC4	688 aa	Known RBP	18.63	■□□□□ 0.57
SREBF1-222	ENST00000583732	RNF208	Q9H0X6	261 aa		18.63	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms