RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 APAF1O14727 1248 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 TRIM37O94972 964 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 MTHFSDQ2M296 383 aaKnown RBP5.43□□□□□ -1.54
RHOT1-206ENST00000578205 CCDC102BQ68D86 513 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 MCM10Q7L590 875 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 MARCH10Q8NA82 808 aaPredicted RBP5.43□□□□□ -1.54
RHOT1-206ENST00000578205 CARD10Q9BWT7 1032 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 LGR6Q9HBX8 967 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 MON2Q7Z3U7 1717 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 ATP1A2P50993 1020 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 ZCRB1Q8TBF4 217 aaKnown RBP5.43□□□□□ -1.54
RHOT1-206ENST00000578205 PNISRQ8TF01 805 aaKnown RBP5.43□□□□□ -1.54
RHOT1-206ENST00000578205 KIAA1024Q9UPX6 916 aa5.43□□□□□ -1.54
RHOT1-206ENST00000578205 CPDO75976 1380 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 INSRP06213 1382 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 CYP27B1O15528 508 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 AFF1P51825 1210 aaKnown RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 PSAPL1Q6NUJ1 521 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 ZNF530Q6P9A1 599 aaPredicted RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 FMR1NBQ8N0W7 255 aaPredicted RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 RETREG2Q8NC44 543 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 EFCC1Q9HA90 598 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 COL5A2P05997 1499 aaPredicted RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 USP17L3A6NCW0 530 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 USP17L4A6NCW7 530 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 ZBTB7BO15156 539 aaPredicted RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 ATP9BO43861 1147 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 USP17L2Q6R6M4 530 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 SMIM5Q71RC9 77 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 USP17L1Q7RTZ2 530 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 KRT27Q7Z3Y8 459 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 BTLAQ7Z6A9 289 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 DEFB132Q7Z7B7 95 aa5.42□□□□□ -1.54
RHOT1-206ENST00000578205 DMRTC2Q8IXT2 367 aaPredicted RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 BRD4O60885 1362 aaPredicted RBP5.42□□□□□ -1.54
RHOT1-206ENST00000578205 SLIT2O94813 1529 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 NFAT5O94916 1531 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 ELL2O00472 640 aaPredicted RBP5.41□□□□□ -1.54
RHOT1-206ENST00000578205 SLC39A6Q13433 755 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 SSBP4Q9BWG4 385 aaPredicted RBP5.41□□□□□ -1.54
RHOT1-206ENST00000578205 DNAJB12Q9NXW2 375 aaKnown RBP5.41□□□□□ -1.54
RHOT1-206ENST00000578205 NSD2O96028 1365 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 PPP1R12BO60237 982 aaPredicted RBP5.41□□□□□ -1.54
RHOT1-206ENST00000578205 PTCD1O75127 700 aaKnown RBP5.41□□□□□ -1.54
RHOT1-206ENST00000578205 RGS9O75916 674 aaPredicted RBP5.41□□□□□ -1.54
RHOT1-206ENST00000578205 RIPK4P57078 832 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 CLDN10P78369 228 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 HIF1AQ16665 826 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 ZNF428Q96B54 188 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 PNMA5Q96PV4 448 aa5.41□□□□□ -1.54
RHOT1-206ENST00000578205 NRKQ7Z2Y5 1582 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 ALDH16A1Q8IZ83 802 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 PBXIP1Q96AQ6 731 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 NAGPAQ9UK23 515 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 PEAK1Q9H792 1746 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 RGPD2P0DJD1 1756 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 CRB1P82279 1406 aa5.4□□□□□ -1.54
RHOT1-206ENST00000578205 LTN1O94822 1766 aa5.4□□□□□ -1.55
RHOT1-206ENST00000578205 M0R2N6 131 aa5.4□□□□□ -1.55
RHOT1-206ENST00000578205 HNRNPUQ00839 825 aaKnown RBP eCLIP5.4□□□□□ -1.55
RHOT1-206ENST00000578205 MAPK8IP3Q9UPT6 1336 aa5.4□□□□□ -1.55
RHOT1-206ENST00000578205 NPC1L1Q9UHC9 1359 aa5.4□□□□□ -1.55
RHOT1-206ENST00000578205 SMG6Q86US8 1419 aaKnown RBP5.4□□□□□ -1.55
RHOT1-206ENST00000578205 MARF1Q9Y4F3 1742 aaKnown RBP5.4□□□□□ -1.55
RHOT1-206ENST00000578205 TCERG1O14776 1098 aaKnown RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 KCNQ3O43525 872 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 NEFMP07197 916 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 PLEKHO1Q53GL0 409 aaPredicted RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 C1orf141Q5JVX7 400 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 PLEKHM2Q8IWE5 1019 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 TSEN2Q8NCE0 465 aaKnown RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 IL17REQ8NFR9 667 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 IGSF1Q8N6C5 1336 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 SLIT3O75094 1523 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 MEGF6O75095 1541 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 PIP4K2AP48426 406 aaPredicted RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 LARGE2Q8N3Y3 721 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 OGFOD1Q8N543 542 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 KIF20BQ96Q89 1820 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 GSX2Q9BZM3 304 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 RBM19Q9Y4C8 960 aaKnown RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 SHPRHQ149N8 1683 aa5.39□□□□□ -1.55
RHOT1-206ENST00000578205 PHRF1Q9P1Y6 1649 aaKnown RBP5.39□□□□□ -1.55
RHOT1-206ENST00000578205 NFKB1P19838 968 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 KRT24Q2M2I5 525 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 ASAP1Q9ULH1 1129 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 SPG7Q9UQ90 795 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 PHKG2P15735 406 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 TMPOP42166 694 aaKnown RBP5.38□□□□□ -1.55
RHOT1-206ENST00000578205 CCINQ13939 588 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 CRTC2Q53ET0 693 aaPredicted RBP5.38□□□□□ -1.55
RHOT1-206ENST00000578205 MSL1Q68DK7 614 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 IFNL2Q8IZJ0 200 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 DTWD1Q8N5C7 304 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 WFDC12Q8WWY7 111 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 RTF1Q92541 710 aaKnown RBP5.38□□□□□ -1.55
RHOT1-206ENST00000578205 ZNF594Q96JF6 807 aaPredicted RBP5.38□□□□□ -1.55
RHOT1-206ENST00000578205 PLEKHF1Q96S99 279 aa5.38□□□□□ -1.55
RHOT1-206ENST00000578205 MKRN1Q9UHC7 482 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms