RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MLLT1Q03111 559 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-214ENST00000572365 RAD51AP2Q09MP3 1159 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 C9orf131Q5VYM1 1079 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 TMEM102Q8N9M5 508 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-214ENST00000572365 PBX4Q9BYU1 374 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 PDGFDQ9GZP0 370 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-214ENST00000572365 IGFLR1Q9H665 355 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 PPM1HQ9ULR3 514 aa8.01□□□□□ -1.13
SF3B3-214ENST00000572365 MYOM2P54296 1465 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 CHD4Q14839 1912 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 FAM83GA6ND36 823 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 J3QW42 95 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 ERCC5P28715 1186 aaPredicted RBP8□□□□□ -1.13
SF3B3-214ENST00000572365 PTPN12Q05209 780 aaKnown RBP8□□□□□ -1.13
SF3B3-214ENST00000572365 VPS72Q15906 364 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 NXPE3Q969Y0 559 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 CAMKK2Q96RR4 588 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 OXCT2Q9BYC2 517 aaPredicted RBP8□□□□□ -1.13
SF3B3-214ENST00000572365 SLC6A14Q9UN76 642 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 DCCP43146 1447 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 UNC13BO14795 1591 aa8□□□□□ -1.13
SF3B3-214ENST00000572365 XRN1Q8IZH2 1706 aaKnown RBP8□□□□□ -1.13
SF3B3-214ENST00000572365 PIK3R4Q99570 1358 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 PDE2AO00408 941 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-214ENST00000572365 TRPA1O75762 1119 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 GHRHP01286 108 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 ITPKAP23677 461 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 ADH7P40394 386 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 GRIA4P48058 902 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 FCGRTP55899 365 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 HFE2Q6ZVN8 426 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 ZNF775Q96BV0 537 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-214ENST00000572365 HHIPQ96QV1 700 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 ERBINQ96RT1 1412 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 RBSNQ9H1K0 784 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 RASSF4Q9H2L5 321 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 ZFYVE1Q9HBF4 777 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 COL22A1Q8NFW1 1626 aaPredicted RBP7.99□□□□□ -1.13
SF3B3-214ENST00000572365 NRXN3Q9Y4C0 1643 aa7.99□□□□□ -1.13
SF3B3-214ENST00000572365 SLIT2O94813 1529 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 MYOM3Q5VTT5 1437 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 KCNQ2O43526 872 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 ZC3H6P61129 1189 aaKnown RBP7.98□□□□□ -1.13
SF3B3-214ENST00000572365 ATP11AP98196 1134 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 TBC1D8BQ0IIM8 1120 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 RNFT1Q5M7Z0 435 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 FAM35AQ86V20 835 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 NOC4LQ9BVI4 516 aaKnown RBP7.98□□□□□ -1.13
SF3B3-214ENST00000572365 TGIF2Q9GZN2 237 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 SPON1Q9HCB6 807 aa7.98□□□□□ -1.13
SF3B3-214ENST00000572365 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.98□□□□□ -1.13
SF3B3-214ENST00000572365 ROBO2Q9HCK4 1378 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 TERTO14746 1132 aaKnown RBP7.97□□□□□ -1.13
SF3B3-214ENST00000572365 EIF2AK2P19525 551 aaKnown RBP7.97□□□□□ -1.13
SF3B3-214ENST00000572365 NFX1Q12986 1120 aaKnown RBP7.97□□□□□ -1.13
SF3B3-214ENST00000572365 DTHD1Q6ZMT9 781 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 HS2ST1Q7LGA3 356 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 KRT28Q7Z3Y7 464 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 COL25A1Q9BXS0 654 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-214ENST00000572365 NAGPAQ9UK23 515 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 RGPD1P0DJD0 1748 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 LMTK2Q8IWU2 1503 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 NPHP3Q7Z494 1330 aa7.97□□□□□ -1.13
SF3B3-214ENST00000572365 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
SF3B3-214ENST00000572365 CROCC2H7BZ55 1655 aa7.96□□□□□ -1.13
SF3B3-214ENST00000572365 SPHKAPQ2M3C7 1700 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ELOA3CA0A087WX78 387 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-214ENST00000572365 A0A096LPE4 126 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 A0A1W2PPZ6 126 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ELOA3DA6NLF2 546 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-214ENST00000572365 METTL12A8MUP2 240 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 SMNDC1O75940 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ZBTB7AO95365 584 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 CPB1P15086 417 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 MAP3K10Q02779 954 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ELOA3BQ3SY89 546 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 PERM1Q5SV97 790 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 SLCO4C1Q6ZQN7 724 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ERMP1Q7Z2K6 904 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 WAPLQ7Z5K2 1190 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 GOLGA6L1Q8N7Z2 621 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ELOA3Q8NG57 546 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 PLD4Q96BZ4 506 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 POP1Q99575 1024 aaKnown RBP7.96□□□□□ -1.14
SF3B3-214ENST00000572365 BTG4Q9NY30 223 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 FRRS1LQ9P0K9 344 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 STK26Q9P289 416 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 GGA1Q9UJY5 639 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 TTF2Q9UNY4 1162 aaKnown RBP7.96□□□□□ -1.14
SF3B3-214ENST00000572365 ERBB4Q15303 1308 aa7.96□□□□□ -1.14
SF3B3-214ENST00000572365 PLCH1Q4KWH8 1693 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 TNS1Q9HBL0 1735 aaKnown RBP7.95□□□□□ -1.14
SF3B3-214ENST00000572365 PXDNQ92626 1479 aa7.95□□□□□ -1.14
SF3B3-214ENST00000572365 SRSF11Q05519 484 aaKnown RBP7.95□□□□□ -1.14
SF3B3-214ENST00000572365 RPS26P11Q5JNZ5 115 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-214ENST00000572365 SLC16A10Q8TF71 515 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms