RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 KIF16BQ96L93 1317 aa10.91□□□□□ -0.66
SMG1-216ENST00000569122 CTNND1O60716 968 aaKnown RBP10.91□□□□□ -0.66
SMG1-216ENST00000569122 IFIT1P09914 478 aaKnown RBP10.91□□□□□ -0.66
SMG1-216ENST00000569122 GRIK5Q16478 980 aa10.91□□□□□ -0.66
SMG1-216ENST00000569122 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
SMG1-216ENST00000569122 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
SMG1-216ENST00000569122 IQSEC3Q9UPP2 1182 aaPredicted RBP10.91□□□□□ -0.66
SMG1-216ENST00000569122 OTOFQ9HC10 1997 aa10.9□□□□□ -0.66
SMG1-216ENST00000569122 ALDH1L1O75891 902 aa10.9□□□□□ -0.66
SMG1-216ENST00000569122 PDE8BO95263 885 aa10.9□□□□□ -0.66
SMG1-216ENST00000569122 CCDC27Q2M243 656 aa10.9□□□□□ -0.66
SMG1-216ENST00000569122 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.66
SMG1-216ENST00000569122 PROCA1Q8NCQ7 364 aaPredicted RBP10.9□□□□□ -0.66
SMG1-216ENST00000569122 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
SMG1-216ENST00000569122 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
SMG1-216ENST00000569122 USP40Q9NVE5 1235 aa10.9□□□□□ -0.66
SMG1-216ENST00000569122 MYH3P11055 1940 aa10.9□□□□□ -0.67
SMG1-216ENST00000569122 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
SMG1-216ENST00000569122 ENTPD3O75355 529 aa10.89□□□□□ -0.67
SMG1-216ENST00000569122 XRCC5P13010 732 aaKnown RBP10.89□□□□□ -0.67
SMG1-216ENST00000569122 EPHA10Q5JZY3 1008 aa10.89□□□□□ -0.67
SMG1-216ENST00000569122 ZSCAN29Q8IWY8 852 aaPredicted RBP10.89□□□□□ -0.67
SMG1-216ENST00000569122 GUCD1Q96NT3 240 aa10.89□□□□□ -0.67
SMG1-216ENST00000569122 GNL3LQ9NVN8 582 aaKnown RBP10.89□□□□□ -0.67
SMG1-216ENST00000569122 PRKAG2Q9UGJ0 569 aa10.89□□□□□ -0.67
SMG1-216ENST00000569122 IL16Q14005 1332 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 TRIM75PA6NK02 468 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 LDHBP07195 334 aaKnown RBP10.88□□□□□ -0.67
SMG1-216ENST00000569122 MDM2Q00987 491 aaPredicted RBP10.88□□□□□ -0.67
SMG1-216ENST00000569122 MAP3K10Q02779 954 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 PUM3Q15397 648 aaKnown RBP10.88□□□□□ -0.67
SMG1-216ENST00000569122 SLF2Q8IX21 1173 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 MAFAQ8NHW3 353 aaPredicted RBP10.88□□□□□ -0.67
SMG1-216ENST00000569122 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 IDI2Q9BXS1 227 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 PUS3Q9BZE2 481 aaKnown RBP10.88□□□□□ -0.67
SMG1-216ENST00000569122 FAM198AQ9UFP1 575 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 GJD2Q9UKL4 321 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 DAGLAQ9Y4D2 1042 aa10.88□□□□□ -0.67
SMG1-216ENST00000569122 ARAP2Q8WZ64 1704 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 COL6A1P12109 1028 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 NFIAQ12857 509 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 PDE3AQ14432 1141 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
SMG1-216ENST00000569122 MAP3K21Q5TCX8 1036 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 ZGPATQ8N5A5 531 aaKnown RBP10.87□□□□□ -0.67
SMG1-216ENST00000569122 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 SRCIN1Q9C0H9 1055 aa10.87□□□□□ -0.67
SMG1-216ENST00000569122 SPEF2Q9C093 1822 aa10.86□□□□□ -0.67
SMG1-216ENST00000569122 F6X3S4 739 aa10.86□□□□□ -0.67
SMG1-216ENST00000569122 PRKAR2AP13861 404 aaKnown RBP10.86□□□□□ -0.67
SMG1-216ENST00000569122 SLC5A1P13866 664 aa10.86□□□□□ -0.67
SMG1-216ENST00000569122 CCAR1Q8IX12 1150 aaKnown RBP10.86□□□□□ -0.67
SMG1-216ENST00000569122 LPIN2Q92539 896 aa10.86□□□□□ -0.67
SMG1-216ENST00000569122 FAM161BQ96MY7 647 aa10.86□□□□□ -0.67
SMG1-216ENST00000569122 CDX2Q99626 313 aaPredicted RBP10.86□□□□□ -0.67
SMG1-216ENST00000569122 PFASO15067 1338 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 VCANP13611 3396 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 TBC1D12O60347 775 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 VAMP4O75379 141 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 ZKSCAN1P17029 563 aaPredicted RBP10.85□□□□□ -0.67
SMG1-216ENST00000569122 COL9A1P20849 921 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 RGS3P49796 1198 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 VGLL2Q8N8G2 317 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 ZNF280CQ8ND82 737 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 GTF3C2Q8WUA4 911 aaPredicted RBP10.85□□□□□ -0.67
SMG1-216ENST00000569122 OSBPL5Q9H0X9 879 aaPredicted RBP10.85□□□□□ -0.67
SMG1-216ENST00000569122 SEMA6BQ9H3T3 888 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 MORF4L1Q9UBU8 362 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
SMG1-216ENST00000569122 SEMA3EO15041 775 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 MSCO60682 206 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 CYP2B6P20813 491 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 MAPK4P31152 587 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 SMAD3P84022 425 aaKnown RBP10.84□□□□□ -0.67
SMG1-216ENST00000569122 DIXDC1Q155Q3 683 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 LRRC26Q2I0M4 334 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 RABL6Q3YEC7 729 aaPredicted RBP10.84□□□□□ -0.67
SMG1-216ENST00000569122 LRRC24Q50LG9 513 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 SLC4A10Q6U841 1118 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 TRIB2Q92519 343 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 SUCLG2Q96I99 432 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 AS3MTQ9HBK9 375 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 DENND2AQ9ULE3 1009 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 SALL1Q9NSC2 1324 aa10.84□□□□□ -0.67
SMG1-216ENST00000569122 ATRNL1Q5VV63 1379 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 TMEM265A0A087WTH1 108 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 TNFRSF10AO00220 468 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
SMG1-216ENST00000569122 MAP4K4O95819 1239 aaPredicted RBP10.83□□□□□ -0.68
SMG1-216ENST00000569122 FGFR2P21802 821 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 RGS2P41220 211 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 IRX3P78415 501 aaPredicted RBP10.83□□□□□ -0.68
SMG1-216ENST00000569122 TRIM32Q13049 653 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 SPP2Q13103 211 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 TJAP1Q5JTD0 557 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 TREML2Q5T2D2 321 aa10.83□□□□□ -0.68
SMG1-216ENST00000569122 ZFPM1Q8IX07 1006 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms