RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TTF1Q15361 905 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 C1orf228Q6PIY5 440 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 PNMA1Q8ND90 353 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 MPP4Q96JB8 637 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 RMI1Q9H9A7 625 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 KIAA1468Q9P260 1216 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 ASAP1Q9ULH1 1129 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 PCDHB15Q9Y5E8 787 aa3.65□□□□□ -1.82
CHD9-216ENST00000565803 MAGED1Q9Y5V3 778 aaPredicted RBP3.65□□□□□ -1.82
CHD9-216ENST00000565803 VPS8Q8N3P4 1428 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 SHTN1A0MZ66 631 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 SSC5DA1L4H1 1573 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 POTEMA6NI47 508 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 RBP3P10745 1247 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 DAPK1P53355 1430 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 DPYDQ12882 1025 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 TRIM14Q14142 442 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 TAF3Q5VWG9 929 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 NUDT18Q6ZVK8 323 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 PACS2Q86VP3 889 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 NDUFAF2Q8N183 169 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 RBSNQ9H1K0 784 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 ALG2Q9H553 416 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 ARNT2Q9HBZ2 717 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 AASDHPPTQ9NRN7 309 aa3.65□□□□□ -1.83
CHD9-216ENST00000565803 CWC25Q9NXE8 425 aaPredicted RBP3.65□□□□□ -1.83
CHD9-216ENST00000565803 CGNQ9P2M7 1197 aaKnown RBP3.65□□□□□ -1.83
CHD9-216ENST00000565803 TRPM7Q96QT4 1865 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 MOXD2PA6NHM9 499 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 APBA3O96018 575 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 CCDC175P0C221 793 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 TDO2P48775 406 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 NEK3P51956 506 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP46P62068 366 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 CBLBQ13191 982 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 PICALMQ13492 652 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 CCSAPQ6IQ19 270 aaPredicted RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 RSBN1LQ6PCB5 846 aaPredicted RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 RSRC2Q7L4I2 434 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 METTL16Q86W50 562 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 MGARPQ8TDB4 240 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 PARD3BQ8TEW8 1205 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 SH3TC2Q8TF17 1288 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 LRRN4Q8WUT4 740 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 APPBP2Q92624 585 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 SELENOOQ9BVL4 669 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 GEMIN8Q9NWZ8 242 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP25Q9UHP3 1055 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L5A8MUK1 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L15C9J2P7 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L10C9JJH3 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L13C9JLJ4 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L12C9JPN9 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L11C9JVI0 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L21D6R901 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L18D6R9N7 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L22D6RA61 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L17D6RBQ6 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L19D6RCP7 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L20D6RJB6 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 HTATSF1O43719 755 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 LZTS3O60299 673 aaPredicted RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 ATP6V1E1P36543 226 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 EMP3P54852 163 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 PSMC1P62191 440 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 USP17L24Q0WX57 530 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 INF2Q27J81 1249 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 DNAJC21Q5F1R6 531 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 TTC30AQ86WT1 665 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 SIX5Q8N196 739 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 RNPC3Q96LT9 517 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 CNNM2Q9H8M5 875 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 AVENQ9NQS1 362 aaPredicted RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 ST7Q9NRC1 585 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 CEP126Q9P2H0 1117 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 POLG2Q9UHN1 485 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 TMCC3Q9ULS5 477 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 PRKAB1Q9Y478 270 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 CRB1P82279 1406 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 ESYT3A0FGR9 886 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 hCG_1984214I3L0E3 225 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 TSPAN6O43657 245 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 AGR2O95994 175 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 ZBED6P86452 979 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 CTDSPL2Q05D32 466 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 PDE1CQ14123 709 aaPredicted RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 MAPRE1Q15691 268 aaKnown RBP3.64□□□□□ -1.83
CHD9-216ENST00000565803 DESI1Q6ICB0 168 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 GAS2L2Q8NHY3 880 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 SKA1Q96BD8 255 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 SMC3Q9UQE7 1217 aa3.64□□□□□ -1.83
CHD9-216ENST00000565803 SOWAHBA6NEL2 793 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 TIPRLO75663 272 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 NEFHP12036 1026 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 ITGAEP38570 1179 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 CASP2P42575 452 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 MAPK9P45984 424 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 RAB27AP51159 221 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 SEC13P55735 322 aa3.63□□□□□ -1.83
CHD9-216ENST00000565803 SNX16P57768 344 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms