RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 GPATCH3Q96I76 525 aa22.74■■□□□ 1.23
CMTM3-210ENST00000565666 WNK4Q96J92 1243 aa22.74■■□□□ 1.23
CMTM3-210ENST00000565666 WRNIP1Q96S55 665 aa22.74■■□□□ 1.23
CMTM3-210ENST00000565666 CSRNP1Q96S65 589 aa22.74■■□□□ 1.23
CMTM3-210ENST00000565666 ZBTB47Q9UFB7 747 aaPredicted RBP22.74■■□□□ 1.23
CMTM3-210ENST00000565666 HSPA8P11142 646 aaKnown RBP22.73■■□□□ 1.23
CMTM3-210ENST00000565666 LBX1P52954 281 aa22.73■■□□□ 1.23
CMTM3-210ENST00000565666 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.73■■□□□ 1.23
CMTM3-210ENST00000565666 SH3RF3Q8TEJ3 882 aaPredicted RBP22.73■■□□□ 1.23
CMTM3-210ENST00000565666 PAG1Q9NWQ8 432 aa22.73■■□□□ 1.23
CMTM3-210ENST00000565666 TSKSQ9UJT2 592 aa22.73■■□□□ 1.23
CMTM3-210ENST00000565666 ZBTB48P10074 688 aaPredicted RBP22.72■■□□□ 1.23
CMTM3-210ENST00000565666 PPP4CP60510 307 aa22.72■■□□□ 1.23
CMTM3-210ENST00000565666 SREBF2Q12772 1141 aa22.72■■□□□ 1.23
CMTM3-210ENST00000565666 VGLL4Q14135 290 aa22.72■■□□□ 1.23
CMTM3-210ENST00000565666 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
CMTM3-210ENST00000565666 NPM3O75607 178 aaKnown RBP22.71■■□□□ 1.23
CMTM3-210ENST00000565666 HDAC1Q13547 482 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-210ENST00000565666 TMED8Q6PL24 325 aaPredicted RBP22.71■■□□□ 1.23
CMTM3-210ENST00000565666 MIGA1Q8NAN2 632 aa22.71■■□□□ 1.23
CMTM3-210ENST00000565666 EDC3Q96F86 508 aaKnown RBP22.71■■□□□ 1.23
CMTM3-210ENST00000565666 HAUS7Q99871 368 aa22.71■■□□□ 1.23
CMTM3-210ENST00000565666 CDK5RAP2Q96SN8 1893 aa22.71■■□□□ 1.23
CMTM3-210ENST00000565666 DDTLA6NHG4 134 aaPredicted RBP22.7■■□□□ 1.22
CMTM3-210ENST00000565666 DYNLL1P63167 89 aaKnown RBP22.7■■□□□ 1.22
CMTM3-210ENST00000565666 SLC9C2Q5TAH2 1124 aa22.7■■□□□ 1.22
CMTM3-210ENST00000565666 SH3BP5LQ7L8J4 393 aa22.7■■□□□ 1.22
CMTM3-210ENST00000565666 ZKSCAN4Q969J2 545 aaPredicted RBP22.7■■□□□ 1.22
CMTM3-210ENST00000565666 OPTNQ96CV9 577 aa22.7■■□□□ 1.22
CMTM3-210ENST00000565666 OSBPL5Q9H0X9 879 aaPredicted RBP22.7■■□□□ 1.22
CMTM3-210ENST00000565666 FOCADQ5VW36 1801 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 MANSC4A6NHS7 340 aaPredicted RBP22.69■■□□□ 1.22
CMTM3-210ENST00000565666 TRPA1O75762 1119 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 CERS3Q8IU89 383 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 TGFBRAP1Q8WUH2 860 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 GCC1Q96CN9 775 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 PRDM10Q9NQV6 1147 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 RNF186Q9NXI6 227 aa22.69■■□□□ 1.22
CMTM3-210ENST00000565666 COL2A1P02458 1487 aaPredicted RBP22.68■■□□□ 1.22
CMTM3-210ENST00000565666 ATRNL1Q5VV63 1379 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 PDE6AP16499 860 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 INPP5BP32019 993 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 ANKRD45Q5TZF3 282 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.68■■□□□ 1.22
CMTM3-210ENST00000565666 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
CMTM3-210ENST00000565666 SAGE1Q9NXZ1 904 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 SNCAIPQ9Y6H5 919 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 PCNTO95613 3336 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 LAMB1P07942 1786 aa22.68■■□□□ 1.22
CMTM3-210ENST00000565666 GJA5P36382 358 aa22.67■■□□□ 1.22
CMTM3-210ENST00000565666 TM4SF4P48230 202 aa22.67■■□□□ 1.22
CMTM3-210ENST00000565666 COL13A1Q5TAT6 717 aaPredicted RBP22.67■■□□□ 1.22
CMTM3-210ENST00000565666 MAPKAPK5Q8IW41 473 aa22.67■■□□□ 1.22
CMTM3-210ENST00000565666 CNKSR2Q8WXI2 1034 aa22.67■■□□□ 1.22
CMTM3-210ENST00000565666 OTUD5Q96G74 571 aa22.67■■□□□ 1.22
CMTM3-210ENST00000565666 FLT1P17948 1338 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 ZNF532Q9HCE3 1301 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 MAGEB6P1A0A0J9YX57 407 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 USP5P45974 858 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 INHBEP58166 350 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 IRX6P78412 446 aaPredicted RBP22.66■■□□□ 1.22
CMTM3-210ENST00000565666 TSHZ3Q63HK5 1081 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 ERO1BQ86YB8 467 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 ZNF112Q9UJU3 913 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 MYH7P12883 1935 aa22.66■■□□□ 1.22
CMTM3-210ENST00000565666 SPDYE5A6NIY4 337 aa22.65■■□□□ 1.22
CMTM3-210ENST00000565666 DHX36Q9H2U1 1008 aaKnown RBP22.65■■□□□ 1.22
CMTM3-210ENST00000565666 TTC41PQ6P2S7 1318 aa22.64■■□□□ 1.22
CMTM3-210ENST00000565666 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.64■■□□□ 1.21
CMTM3-210ENST00000565666 ERC2O15083 957 aa22.63■■□□□ 1.21
CMTM3-210ENST00000565666 SLURP2P0DP57 97 aa22.63■■□□□ 1.21
CMTM3-210ENST00000565666 GTF2A2P52657 109 aa22.63■■□□□ 1.21
CMTM3-210ENST00000565666 ZSCAN25Q6NSZ9 544 aa22.63■■□□□ 1.21
CMTM3-210ENST00000565666 OTUD7AQ8TE49 926 aaPredicted RBP22.63■■□□□ 1.21
CMTM3-210ENST00000565666 SAP30BPQ9UHR5 308 aaKnown RBP22.63■■□□□ 1.21
CMTM3-210ENST00000565666 MYH1P12882 1939 aa22.63■■□□□ 1.21
CMTM3-210ENST00000565666 TCRBV5S4A2TA0A5A2 114 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 FAM196BA6NMK8 535 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 PHF20L1A8MW92 1017 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 TBC1D12O60347 775 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 MX1P20591 662 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 ADD2P35612 726 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 MAP3K10Q02779 954 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 NOL9Q5SY16 702 aaKnown RBP22.62■■□□□ 1.21
CMTM3-210ENST00000565666 IFNL1Q8IU54 200 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 RIOK1Q9BRS2 568 aaKnown RBP22.62■■□□□ 1.21
CMTM3-210ENST00000565666 PI4KBQ9UBF8 816 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 DOCK1Q14185 1865 aa22.62■■□□□ 1.21
CMTM3-210ENST00000565666 ALDH1A1P00352 501 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 HLA-DOAP06340 250 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 PPATQ06203 517 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 PPIL2Q13356 520 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 OTUD7BQ6GQQ9 843 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 SCYL3Q8IZE3 742 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 CRACR2BQ8N4Y2 399 aaPredicted RBP22.61■■□□□ 1.21
CMTM3-210ENST00000565666 TRIM34Q9BYJ4 488 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 CRNKL1Q9BZJ0 848 aaKnown RBP22.61■■□□□ 1.21
CMTM3-210ENST00000565666 PICK1Q9NRD5 415 aa22.61■■□□□ 1.21
CMTM3-210ENST00000565666 HERC5Q9UII4 1024 aaKnown RBP22.61■■□□□ 1.21
CMTM3-210ENST00000565666 PALD1Q9ULE6 856 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms