RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 MYO5AQ9Y4I1 1855 aaKnown RBP15.15■□□□□ 0.02
MTHFD1-207ENST00000554677 DDTLA6NHG4 134 aaPredicted RBP15.15■□□□□ 0.02
MTHFD1-207ENST00000554677 PDHXO00330 501 aa15.15■□□□□ 0.02
MTHFD1-207ENST00000554677 ABCF2Q9UG63 623 aa15.15■□□□□ 0.02
MTHFD1-207ENST00000554677 CPA4Q9UI42 421 aa15.15■□□□□ 0.02
MTHFD1-207ENST00000554677 AKAP2Q9Y2D5 859 aa15.15■□□□□ 0.02
MTHFD1-207ENST00000554677 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
MTHFD1-207ENST00000554677 CXCL11O14625 94 aa15.14■□□□□ 0.01
MTHFD1-207ENST00000554677 RHBDL3P58872 404 aa15.14■□□□□ 0.01
MTHFD1-207ENST00000554677 SLC9C1Q4G0N8 1177 aa15.14■□□□□ 0.01
MTHFD1-207ENST00000554677 ATF7IPQ6VMQ6 1270 aa15.14■□□□□ 0.01
MTHFD1-207ENST00000554677 HMG20BQ9P0W2 317 aa15.14■□□□□ 0.01
MTHFD1-207ENST00000554677 GPR75-ASB3A0A0A6YYF3 556 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 PTPRAP18433 802 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 BTDP43251 543 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 MECOMQ03112 1051 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 DZIP1Q86YF9 867 aaKnown RBP15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 SH3TC2Q8TF17 1288 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 AFG3L2Q9Y4W6 797 aa15.13■□□□□ 0.01
MTHFD1-207ENST00000554677 DOCK1Q14185 1865 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 GNRH1P01148 92 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 GNAI2P04899 355 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 PSMC4P43686 418 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 MVPQ14764 893 aaKnown RBP15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 KIF22Q14807 665 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 SPTY2D1Q68D10 685 aaPredicted RBP15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 TBC1D9Q6ZT07 1266 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 NEUROD6Q96NK8 337 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 TMEM106CQ9BVX2 250 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 ZHX2Q9Y6X8 837 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 MROH7-TTC4A0A0A0MT08 1334 aa15.12■□□□□ 0.01
MTHFD1-207ENST00000554677 A0A0G2JLL6 359 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 BCRP11274 1271 aa15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 ARID4AP29374 1257 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 PRMT2P55345 433 aa15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 PRRT2Q7Z6L0 340 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 SLF2Q8IX21 1173 aa15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 FRAT1Q92837 279 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 NSUN4Q96CB9 384 aaKnown RBP15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 SRRDQ9UH36 339 aa15.11■□□□□ 0.01
MTHFD1-207ENST00000554677 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 TBC1D12O60347 775 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 CTNND1O60716 968 aaKnown RBP15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 MYCP01106 439 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 CYP2C8P10632 490 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 OSBPP22059 807 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 MCAMP43121 646 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 PICALMQ13492 652 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 ZSCAN29Q8IWY8 852 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 TMEM57Q8N5G2 664 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 SPATA5Q8NB90 893 aa15.1■□□□□ 0.01
MTHFD1-207ENST00000554677 ATAD5Q96QE3 1844 aa15.09■□□□□ 0.01
MTHFD1-207ENST00000554677 G3BP1Q13283 466 aaKnown RBP eCLIP15.09■□□□□ 0.011e-6■■■□□ 16.3
MTHFD1-207ENST00000554677 POLA2Q14181 598 aa15.09■□□□□ 0.01
MTHFD1-207ENST00000554677 MTFR1Q15390 333 aa15.09■□□□□ 0.01
MTHFD1-207ENST00000554677 SLC4A8Q2Y0W8 1093 aa15.09■□□□□ 0.01
MTHFD1-207ENST00000554677 CCDC84Q86UT8 332 aaPredicted RBP15.09■□□□□ 0.01
MTHFD1-207ENST00000554677 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
MTHFD1-207ENST00000554677 RRP1BQ14684 758 aaKnown RBP15.08■□□□□ 0
MTHFD1-207ENST00000554677 FASTKD5Q7L8L6 764 aaKnown RBP15.08■□□□□ 0
MTHFD1-207ENST00000554677 PARK7Q99497 189 aaKnown RBP15.08■□□□□ 0
MTHFD1-207ENST00000554677 PICK1Q9NRD5 415 aa15.08■□□□□ 0
MTHFD1-207ENST00000554677 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
MTHFD1-207ENST00000554677 SIPA1L1O43166 1804 aa15.08■□□□□ 0
MTHFD1-207ENST00000554677 FAM196BA6NMK8 535 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 FMNL1O95466 1100 aaPredicted RBP15.07■□□□□ 0
MTHFD1-207ENST00000554677 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
MTHFD1-207ENST00000554677 LDHCP07864 332 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 ATP8B2P98198 1209 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 SSH3Q8TE77 659 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 SHISA4Q96DD7 197 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 GABRQQ9UN88 632 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 SLC45A1Q9Y2W3 748 aa15.07■□□□□ 0
MTHFD1-207ENST00000554677 TRIOBPQ9H2D6 2365 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 HOXD10P28358 340 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 GRK4P32298 578 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 GSTO1P78417 241 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 HABP4Q5JVS0 413 aaKnown RBP15.06■□□□□ 0
MTHFD1-207ENST00000554677 GORABQ5T7V8 394 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 ZKSCAN2Q63HK3 967 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 GADL1Q6ZQY3 521 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 OSBPL5Q9H0X9 879 aaPredicted RBP15.06■□□□□ 0
MTHFD1-207ENST00000554677 GPR108Q9NPR9 543 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 RAI14Q9P0K7 980 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 FOCADQ5VW36 1801 aa15.06■□□□□ 0
MTHFD1-207ENST00000554677 TRIM75PA6NK02 468 aa15.05■□□□□ -0
MTHFD1-207ENST00000554677 UQCRFS1P1P0C7P4 283 aa15.05■□□□□ -0
MTHFD1-207ENST00000554677 PRKCZQ05513 592 aa15.05■□□□□ -0
MTHFD1-207ENST00000554677 TNNI3KQ59H18 835 aa15.05■□□□□ -0
MTHFD1-207ENST00000554677 RAET1EQ8TD07 263 aa15.05■□□□□ -0
MTHFD1-207ENST00000554677 GCC1Q96CN9 775 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms