RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 METP08581 1390 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 RAB3GAP2Q9H2M9 1393 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 ROBO1Q9Y6N7 1651 aa6.17□□□□□ -1.42
VTI1B-203ENST00000554636 FAM135BQ49AJ0 1406 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 PRAG1Q86YV5 1406 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 NCOA3Q9Y6Q9 1424 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 PDE2AO00408 941 aaPredicted RBP6.16□□□□□ -1.42
VTI1B-203ENST00000554636 ITGB7P26010 798 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 EHHADHQ08426 723 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 ZNF326Q5BKZ1 582 aaKnown RBP6.16□□□□□ -1.42
VTI1B-203ENST00000554636 SLC7A3Q8WY07 619 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 OSMRQ99650 979 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 ZKSCAN3Q9BRR0 538 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 DZANK1Q9NVP4 752 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 MSH6P52701 1360 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.16□□□□□ -1.42
VTI1B-203ENST00000554636 CCDC144AA2RUR9 1427 aa6.16□□□□□ -1.42
VTI1B-203ENST00000554636 FSCN2O14926 492 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 DDX3YO15523 660 aaKnown RBP6.15□□□□□ -1.42
VTI1B-203ENST00000554636 DYRK3O43781 588 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 WISP1O95388 367 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 FOXD4L6Q3SYB3 417 aaPredicted RBP6.15□□□□□ -1.42
VTI1B-203ENST00000554636 NKAPLQ5M9Q1 402 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 FAM117BQ6P1L5 589 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 FOXD4L3Q6VB84 417 aaPredicted RBP6.15□□□□□ -1.42
VTI1B-203ENST00000554636 TMC1Q8TDI8 760 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 ASAP3Q8TDY4 903 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 PMEPA1Q969W9 287 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 MRPL18Q9H0U6 180 aaKnown RBP6.15□□□□□ -1.42
VTI1B-203ENST00000554636 AKTIPQ9H8T0 292 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 KCNK4Q9NYG8 393 aa6.15□□□□□ -1.42
VTI1B-203ENST00000554636 DISP3Q9P2K9 1392 aa6.15□□□□□ -1.43
VTI1B-203ENST00000554636 PTCH1Q13635 1447 aa6.15□□□□□ -1.43
VTI1B-203ENST00000554636 ASXL1Q8IXJ9 1541 aa6.15□□□□□ -1.43
VTI1B-203ENST00000554636 NALCNQ8IZF0 1738 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 NFKBIEO00221 500 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 NDUFB5O43674 189 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 EDN3P14138 238 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 GLB1P16278 677 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 CD68P34810 354 aaPredicted RBP6.14□□□□□ -1.43
VTI1B-203ENST00000554636 CABP4P57796 275 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 ARHGAP4P98171 946 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 ECM1Q16610 540 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 ACAD11Q709F0 780 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 MAP4K3Q8IVH8 894 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 CACTIN-AS1Q8N1I8 211 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 MEGF10Q96KG7 1140 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 AMOTL2Q9Y2J4 779 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 RPGRIP1LQ68CZ1 1315 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 DCCP43146 1447 aa6.14□□□□□ -1.43
VTI1B-203ENST00000554636 COL16A1Q07092 1604 aaPredicted RBP6.14□□□□□ -1.43
VTI1B-203ENST00000554636 METTL12A8MUP2 240 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 F8W735 103 aaPredicted RBP6.13□□□□□ -1.43
VTI1B-203ENST00000554636 NLRP12P59046 1061 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 PDE4CQ08493 712 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 ORC1Q13415 861 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 USPL1Q5W0Q7 1092 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 CCER1Q8TC90 406 aaPredicted RBP6.13□□□□□ -1.43
VTI1B-203ENST00000554636 UBASH3BQ8TF42 649 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 ZFYVE28Q9HCC9 887 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 SRA1Q9HD15 236 aaKnown RBP6.13□□□□□ -1.43
VTI1B-203ENST00000554636 PIK3C2GO75747 1445 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 ADGRL3Q9HAR2 1447 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 NRXN1Q9ULB1 1477 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 AHDC1Q5TGY3 1603 aaPredicted RBP6.13□□□□□ -1.43
VTI1B-203ENST00000554636 KNDC1Q76NI1 1749 aa6.13□□□□□ -1.43
VTI1B-203ENST00000554636 H3BRJ5 948 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 PHLPP1O60346 1717 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 MYOM2P54296 1465 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 MST1RQ04912 1400 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 HGSNATQ68CP4 663 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 ADGRF5Q8IZF2 1346 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 TMEM102Q8N9M5 508 aaPredicted RBP6.12□□□□□ -1.43
VTI1B-203ENST00000554636 KLHDC7BQ96G42 594 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 ROBO2Q9HCK4 1378 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 SEC31BQ9NQW1 1179 aa6.12□□□□□ -1.43
VTI1B-203ENST00000554636 BIN2Q9UBW5 565 aaPredicted RBP6.12□□□□□ -1.43
VTI1B-203ENST00000554636 TECPR2O15040 1411 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 ANKRD30BQ9BXX2 1392 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 ADAM11O75078 769 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 DUOXA2Q1HG44 320 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 PRSS36Q5K4E3 855 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 PEAR1Q5VY43 1037 aaPredicted RBP6.11□□□□□ -1.43
VTI1B-203ENST00000554636 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.11□□□□□ -1.43
VTI1B-203ENST00000554636 DCAF11Q8TEB1 546 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 FOXD4L4Q8WXT5 416 aaPredicted RBP6.11□□□□□ -1.43
VTI1B-203ENST00000554636 NXPE3Q969Y0 559 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
VTI1B-203ENST00000554636 ADAM19Q9H013 955 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 C19orf44Q9H6X5 657 aa6.11□□□□□ -1.43
VTI1B-203ENST00000554636 NHSL1Q5SYE7 1610 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 LRPPRCP42704 1394 aaKnown RBP6.1□□□□□ -1.43
VTI1B-203ENST00000554636 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 KLHL23Q8NBE8 558 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 BSNDQ8WZ55 320 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 SOX13Q9UN79 622 aa6.1□□□□□ -1.43
VTI1B-203ENST00000554636 LAMC1P11047 1609 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms