RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SHPRHQ149N8 1683 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 PEAK1Q9H792 1746 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 ELOA3CA0A087WX78 387 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-212ENST00000554486 ELOA3DA6NLF2 546 aaPredicted RBP8.44□□□□□ -1.06
SCFD1-212ENST00000554486 NDUFB5O43674 189 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 XYLBO75191 536 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 SNRPNP63162 240 aaKnown RBP8.44□□□□□ -1.06
SCFD1-212ENST00000554486 RRS1Q15050 365 aaKnown RBP8.44□□□□□ -1.06
SCFD1-212ENST00000554486 ELOA3BQ3SY89 546 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 CCDC184Q52MB2 194 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 CHSY3Q70JA7 882 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 ELOA3Q8NG57 546 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 ASB16Q96NS5 453 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 CITED4Q96RK1 184 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 FAM13BQ9NYF5 915 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 POLKQ9UBT6 870 aa8.44□□□□□ -1.06
SCFD1-212ENST00000554486 SMG6Q86US8 1419 aaKnown RBP8.44□□□□□ -1.06
SCFD1-212ENST00000554486 LTN1O94822 1766 aa8.43□□□□□ -1.06
SCFD1-212ENST00000554486 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
SCFD1-212ENST00000554486 MTHFSP49914 203 aa8.43□□□□□ -1.06
SCFD1-212ENST00000554486 XKR5Q6UX68 686 aa8.43□□□□□ -1.06
SCFD1-212ENST00000554486 RAB44Q7Z6P3 723 aaPredicted RBP8.43□□□□□ -1.06
SCFD1-212ENST00000554486 ALYREFQ86V81 257 aaKnown RBP8.43□□□□□ -1.06
SCFD1-212ENST00000554486 KCNH5Q8NCM2 988 aa8.43□□□□□ -1.06
SCFD1-212ENST00000554486 MAP3K19Q56UN5 1328 aa8.43□□□□□ -1.06
SCFD1-212ENST00000554486 CCER2I3L3R5 266 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 SASH3O75995 380 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 CCINQ13939 588 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 DSC3Q14574 896 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 C8orf34Q49A92 452 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 ARHGEF25Q86VW2 580 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 FBXO41Q8TF61 875 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 TNFRSF25Q93038 417 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 TMEM63CQ9P1W3 806 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 JCADQ9P266 1359 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 COL3A1P02461 1466 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-212ENST00000554486 COL18A1P39060 1754 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 RGPD5Q99666 1765 aa8.42□□□□□ -1.06
SCFD1-212ENST00000554486 CDK12Q9NYV4 1490 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-212ENST00000554486 CPDO75976 1380 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 INSRP06213 1382 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 ANKRD33BA6NCL7 494 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 ADARB2-AS1A8MUL3 147 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 GNB5O14775 395 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 TREHO43280 583 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 USP5P45974 858 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 ZC3H6P61129 1189 aaKnown RBP8.41□□□□□ -1.06
SCFD1-212ENST00000554486 NPAS4Q8IUM7 802 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 RGS22Q8NE09 1264 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 BHMTQ93088 406 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
SCFD1-212ENST00000554486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-212ENST00000554486 KIAA0232Q92628 1395 aa8.4□□□□□ -1.06
SCFD1-212ENST00000554486 PPM1GO15355 546 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-212ENST00000554486 PDE12Q6L8Q7 609 aaKnown RBP8.4□□□□□ -1.06
SCFD1-212ENST00000554486 LINC00114Q6XXX2 140 aa8.4□□□□□ -1.06
SCFD1-212ENST00000554486 KRT25Q7Z3Z0 450 aa8.4□□□□□ -1.06
SCFD1-212ENST00000554486 ELP3Q9H9T3 547 aa8.4□□□□□ -1.06
SCFD1-212ENST00000554486 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
SCFD1-212ENST00000554486 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.06
SCFD1-212ENST00000554486 CNTN3Q9P232 1028 aa8.4□□□□□ -1.06
SCFD1-212ENST00000554486 LMO7Q8WWI1 1683 aa8.4□□□□□ -1.07
SCFD1-212ENST00000554486 RTL1A6NKG5 1358 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 FLT4P35916 1363 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 KIF24Q5T7B8 1368 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 FAM83GA6ND36 823 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 TNFRSF21O75509 655 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 IGHA1P01876 353 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 NFKB1P19838 968 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 HOXC9P31274 260 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 AMPHP49418 695 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 DGKGP49619 791 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 HSP90AB2PQ58FF8 381 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 IP6K1Q92551 441 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 ALKBH8Q96BT7 664 aaKnown RBP8.39□□□□□ -1.07
SCFD1-212ENST00000554486 DCAF5Q96JK2 942 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 MDFIQ99750 246 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 NIF3L1Q9GZT8 377 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 CHRDQ9H2X0 955 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-212ENST00000554486 FNDC3AQ9Y2H6 1198 aaKnown RBP8.39□□□□□ -1.07
SCFD1-212ENST00000554486 ABCC6O95255 1503 aa8.39□□□□□ -1.07
SCFD1-212ENST00000554486 MMP20O60882 483 aa8.38□□□□□ -1.07
SCFD1-212ENST00000554486 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
SCFD1-212ENST00000554486 PCSK2P16519 638 aa8.38□□□□□ -1.07
SCFD1-212ENST00000554486 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-212ENST00000554486 IL13P35225 146 aa8.38□□□□□ -1.07
SCFD1-212ENST00000554486 ORC1Q13415 861 aa8.38□□□□□ -1.07
SCFD1-212ENST00000554486 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
SCFD1-212ENST00000554486 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-212ENST00000554486 LRP6O75581 1613 aa8.38□□□□□ -1.07
SCFD1-212ENST00000554486 COL14A1Q05707 1796 aaKnown RBP8.38□□□□□ -1.07
SCFD1-212ENST00000554486 CAMTA1Q9Y6Y1 1673 aa8.37□□□□□ -1.07
SCFD1-212ENST00000554486 SPATA31A6Q5VVP1 1343 aa8.37□□□□□ -1.07
SCFD1-212ENST00000554486 MAP3K6O95382 1288 aa8.37□□□□□ -1.07
SCFD1-212ENST00000554486 CYP2E1P05181 493 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-212ENST00000554486 ADH7P40394 386 aa8.37□□□□□ -1.07
SCFD1-212ENST00000554486 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
SCFD1-212ENST00000554486 EHHADHQ08426 723 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms