RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 MIGA2Q7L4E1 593 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 FAM43AQ8N2R8 423 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 CD99L2Q8TCZ2 262 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 FRAT1Q92837 279 aaPredicted RBP8.16□□□□□ -1.1
SLIRP-203ENST00000554074 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 GPR108Q9NPR9 543 aa8.16□□□□□ -1.1
SLIRP-203ENST00000554074 MROH7-TTC4A0A0A0MT08 1334 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 GPR75-ASB3A0A0A6YYF3 556 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 PNMA6EA0A0J9YXQ4 647 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 BTBD19C9JJ37 291 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 CXCL11O14625 94 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 GNRH1P01148 92 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 LDHCP07864 332 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 UQCRFS1P1P0C7P4 283 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 RGS3P49796 1198 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 GSTO1P78417 241 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 HNRNPUQ00839 825 aaKnown RBP eCLIP8.15□□□□□ -1.1
SLIRP-203ENST00000554074 ANKRD23Q86SG2 305 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 TMEM57Q8N5G2 664 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 SPATA5Q8NB90 893 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 SSH3Q8TE77 659 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 HMG20BQ9P0W2 317 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 ABCF2Q9UG63 623 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 TNNQ9UQP3 1299 aa8.15□□□□□ -1.1
SLIRP-203ENST00000554074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.15□□□□□ -1.1
SLIRP-203ENST00000554074 ZBED9Q6R2W3 1325 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 TBC1D12O60347 775 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 BTDP43251 543 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 PRMT2P55345 433 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 ATP8B2P98198 1209 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 MECOMQ03112 1051 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 GORABQ5T7V8 394 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 ZFPM1Q8IX07 1006 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 SCYL3Q8IZE3 742 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.14□□□□□ -1.11
SLIRP-203ENST00000554074 NSUN4Q96CB9 384 aaKnown RBP8.14□□□□□ -1.11
SLIRP-203ENST00000554074 ZNF512BQ96KM6 892 aaPredicted RBP8.14□□□□□ -1.11
SLIRP-203ENST00000554074 NEUROD6Q96NK8 337 aa8.14□□□□□ -1.11
SLIRP-203ENST00000554074 NOP58Q9Y2X3 529 aaKnown RBP8.14□□□□□ -1.11
SLIRP-203ENST00000554074 MYH7P12883 1935 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 ADGRA2Q96PE1 1338 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
SLIRP-203ENST00000554074 CTNND1O60716 968 aaKnown RBP8.13□□□□□ -1.11
SLIRP-203ENST00000554074 MCAMP43121 646 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 RHBDL3P58872 404 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 LACTBP83111 547 aaPredicted RBP8.13□□□□□ -1.11
SLIRP-203ENST00000554074 CAP1Q01518 475 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 MOGSQ13724 837 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 KIF22Q14807 665 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 TNNI3KQ59H18 835 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 C17orf99Q6UX52 265 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 FTSJ3Q8IY81 847 aaKnown RBP8.13□□□□□ -1.11
SLIRP-203ENST00000554074 ZNF384Q8TF68 577 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 DDX4Q9NQI0 724 aaKnown RBP8.13□□□□□ -1.11
SLIRP-203ENST00000554074 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 SLC45A1Q9Y2W3 748 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 FPGT-TNNI3KV9GXZ4 949 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 MYH8P13535 1937 aa8.13□□□□□ -1.11
SLIRP-203ENST00000554074 MKI67P46013 3256 aaKnown RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 A0A0G2JLL6 359 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 DDTLA6NHG4 134 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PDHXO00330 501 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PTPRAP18433 802 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 CCDC158Q5M9N0 1113 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PRPF38BQ5VTL8 546 aaKnown RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 TMED8Q6PL24 325 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PI16Q6UXB8 463 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 FASTKD5Q7L8L6 764 aaKnown RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PRRT2Q7Z6L0 340 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 NBPF11Q86T75 865 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 ZSCAN29Q8IWY8 852 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 ZNF333Q96JL9 665 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PARK7Q99497 189 aaKnown RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 TBC1D2Q9BYX2 928 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 OSBPL5Q9H0X9 879 aaPredicted RBP8.12□□□□□ -1.11
SLIRP-203ENST00000554074 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 AFG3L2Q9Y4W6 797 aa8.12□□□□□ -1.11
SLIRP-203ENST00000554074 SURF6O75683 361 aaKnown RBP8.11□□□□□ -1.11
SLIRP-203ENST00000554074 MS4A1P11836 297 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 RLBP1P12271 317 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 PLCG2P16885 1265 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 PPP4CP60510 307 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 OS9Q13438 667 aaPredicted RBP8.11□□□□□ -1.11
SLIRP-203ENST00000554074 SLC9C1Q4G0N8 1177 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 GPAT2Q6NUI2 795 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 TBC1D9Q6ZT07 1266 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 ITPRIPQ8IWB1 547 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 NOL10Q9BSC4 688 aaKnown RBP8.11□□□□□ -1.11
SLIRP-203ENST00000554074 RAI14Q9P0K7 980 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 LRP2BPQ9P2M1 347 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 HERC5Q9UII4 1024 aaKnown RBP8.11□□□□□ -1.11
SLIRP-203ENST00000554074 PTCH2Q9Y6C5 1203 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 ZHX2Q9Y6X8 837 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 NAV1Q8NEY1 1877 aa8.11□□□□□ -1.11
SLIRP-203ENST00000554074 DDX60LQ5H9U9 1706 aaKnown RBP8.1□□□□□ -1.11
SLIRP-203ENST00000554074 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms