RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 TTLL11Q8NHH1 800 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 FAM217BQ9NTX9 383 aaPredicted RBP27.17■■□□□ 1.94
NPAS3-211ENST00000551634 PCDHA5Q9Y5H7 936 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 UBN2Q6ZU65 1347 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 ITGA6P23229 1130 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 TAF3Q5VWG9 929 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 NFXL1Q6ZNB6 911 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 VGLL2Q8N8G2 317 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 CLIC6Q96NY7 704 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 PIH1D3Q9NQM4 214 aaKnown RBP27.16■■□□□ 1.94
NPAS3-211ENST00000551634 ECM29Q5VYK3 1845 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 ZNF532Q9HCE3 1301 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 ANKRD18BA2A2Z9 1011 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 ARHGAP6O43182 974 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 RXRAP19793 462 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 GIGYF2Q6Y7W6 1299 aaKnown RBP27.16■■□□□ 1.94
NPAS3-211ENST00000551634 REXO1L1PQ8IX06 675 aa27.16■■□□□ 1.94
NPAS3-211ENST00000551634 RANBP6O60518 1105 aaKnown RBP27.15■■□□□ 1.94
NPAS3-211ENST00000551634 UQCRFS1P1P0C7P4 283 aa27.15■■□□□ 1.94
NPAS3-211ENST00000551634 SSRP1Q08945 709 aaKnown RBP27.15■■□□□ 1.94
NPAS3-211ENST00000551634 FOXP4Q8IVH2 680 aaPredicted RBP27.15■■□□□ 1.94
NPAS3-211ENST00000551634 NKX2-3Q8TAU0 364 aa27.15■■□□□ 1.94
NPAS3-211ENST00000551634 FANCLQ9NW38 375 aa27.15■■□□□ 1.94
NPAS3-211ENST00000551634 IDH1O75874 414 aaKnown RBP27.15■■□□□ 1.94
NPAS3-211ENST00000551634 PDE6AP16499 860 aa27.15■■□□□ 1.94
NPAS3-211ENST00000551634 ARID4AP29374 1257 aaPredicted RBP27.15■■□□□ 1.94
NPAS3-211ENST00000551634 TMEM67Q5HYA8 995 aa27.15■■□□□ 1.94
NPAS3-211ENST00000551634 CNNM1Q9NRU3 951 aa27.15■■□□□ 1.94
NPAS3-211ENST00000551634 NID2Q14112 1375 aa27.14■■□□□ 1.94
NPAS3-211ENST00000551634 STRBPQ96SI9 672 aaKnown RBP27.14■■□□□ 1.94
NPAS3-211ENST00000551634 UTP14AQ9BVJ6 771 aaKnown RBP27.14■■□□□ 1.94
NPAS3-211ENST00000551634 PRDM11Q9NQV5 511 aa27.14■■□□□ 1.94
NPAS3-211ENST00000551634 GOLGA6L9A6NEM1 432 aa27.14■■□□□ 1.93
NPAS3-211ENST00000551634 MDM2Q00987 491 aaPredicted RBP27.14■■□□□ 1.93
NPAS3-211ENST00000551634 SYTL4Q96C24 671 aaPredicted RBP27.14■■□□□ 1.93
NPAS3-211ENST00000551634 NOL10Q9BSC4 688 aaKnown RBP27.14■■□□□ 1.93
NPAS3-211ENST00000551634 CARD10Q9BWT7 1032 aa27.14■■□□□ 1.93
NPAS3-211ENST00000551634 SENP2Q9HC62 589 aa27.14■■□□□ 1.93
NPAS3-211ENST00000551634 ZNF330Q9Y3S2 320 aaPredicted RBP27.14■■□□□ 1.93
NPAS3-211ENST00000551634 TCRBV5S4A2TA0A5A2 114 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 FMNL1O95466 1100 aaPredicted RBP27.13■■□□□ 1.93
NPAS3-211ENST00000551634 NOSTRINQ8IVI9 506 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 UBXN4Q92575 508 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 GREM2Q9H772 168 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 NPHP1O15259 732 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 PDE8BO95263 885 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 IFNAR1P17181 557 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 ARHGAP29Q52LW3 1261 aa27.13■■□□□ 1.93
NPAS3-211ENST00000551634 ARGLU1Q9NWB6 273 aaPredicted RBP27.13■■□□□ 1.93
NPAS3-211ENST00000551634 TPM1P09493 284 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 CLCN6P51797 869 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 CTSWP56202 376 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 TBX2Q13207 712 aaPredicted RBP27.12■■□□□ 1.93
NPAS3-211ENST00000551634 AIDAQ96BJ3 306 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 CNNM2Q9H8M5 875 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 DACH1Q9UI36 760 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 SLC12A7Q9Y666 1083 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 LRP6O75581 1613 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 COL5A2P05997 1499 aaPredicted RBP27.12■■□□□ 1.93
NPAS3-211ENST00000551634 SHANK3Q9BYB0 1731 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 SAFBQ15424 915 aaKnown RBP eCLIP27.12■■□□□ 1.93
NPAS3-211ENST00000551634 NT5DC1Q5TFE4 455 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 TMEM139Q8IV31 216 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 LRRN4CLQ8ND94 238 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 MPHOSPH8Q99549 860 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 TMOD3Q9NYL9 352 aa27.12■■□□□ 1.93
NPAS3-211ENST00000551634 PATL2C9JE40 543 aaKnown RBP27.11■■□□□ 1.93
NPAS3-211ENST00000551634 NLRP10Q86W26 655 aa27.11■■□□□ 1.93
NPAS3-211ENST00000551634 MLKLQ8NB16 471 aa27.11■■□□□ 1.93
NPAS3-211ENST00000551634 SLC26A6Q9BXS9 759 aa27.11■■□□□ 1.93
NPAS3-211ENST00000551634 EFCAB8A8MWE9 144 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 TMEM232C9JQI7 657 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 STARD3NLO95772 234 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 BMP6P22004 513 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 MNS1Q8NEH6 495 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 STX10O60499 249 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 MMP1P03956 469 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 INTS13Q9NVM9 706 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 IFIT3O14879 490 aaKnown RBP27.1■■□□□ 1.93
NPAS3-211ENST00000551634 PTPREP23469 700 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 TRIML1Q8N9V2 468 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 ENOX1Q8TC92 643 aaKnown RBP27.1■■□□□ 1.93
NPAS3-211ENST00000551634 PPP2R2CQ9Y2T4 447 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 FHOD1Q9Y613 1164 aa27.1■■□□□ 1.93
NPAS3-211ENST00000551634 MYO5AQ9Y4I1 1855 aaKnown RBP27.09■■□□□ 1.93
NPAS3-211ENST00000551634 PDE4BQ07343 736 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 RILPL1Q5EBL4 403 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 DNAJC10Q8IXB1 793 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 STK11IPQ8N1F8 1099 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 ZNF579Q8NAF0 562 aaKnown RBP27.09■■□□□ 1.93
NPAS3-211ENST00000551634 KRT23Q9C075 422 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 FOXP1Q9H334 677 aaPredicted RBP27.09■■□□□ 1.93
NPAS3-211ENST00000551634 ZSWIM5Q9P217 1185 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 WWC3Q9ULE0 1092 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 TADA3O75528 432 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 PHKA1P46020 1223 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 POSTNQ15063 836 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 IFNL3Q8IZI9 196 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 MAN1B1Q9UKM7 699 aa27.09■■□□□ 1.93
NPAS3-211ENST00000551634 PARP3Q9Y6F1 533 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms