RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SMARCE1Q969G3 411 aa6.68□□□□□ -1.34
CHD4-206ENST00000536999 LTV1Q96GA3 475 aaPredicted RBP6.68□□□□□ -1.34
CHD4-206ENST00000536999 COPRSQ9NQ92 184 aa6.68□□□□□ -1.34
CHD4-206ENST00000536999 DDX21Q9NR30 783 aaKnown RBP eCLIP6.68□□□□□ -1.34
CHD4-206ENST00000536999 ATG3Q9NT62 314 aa6.68□□□□□ -1.34
CHD4-206ENST00000536999 ABCC12Q96J65 1359 aa6.68□□□□□ -1.34
CHD4-206ENST00000536999 MED23Q9ULK4 1368 aa6.68□□□□□ -1.34
CHD4-206ENST00000536999 TAF1LQ8IZX4 1826 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 IQCA1LA6NCM1 817 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 BTBD11A6QL63 1104 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 CPLX1O14810 134 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 SEMA3EO15041 775 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 SPTLC2O15270 562 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 KIF5CO60282 957 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 ZRANB2O95218 330 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD4-206ENST00000536999 PNMA6AP0CW24 399 aaPredicted RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 HOXA7P31268 230 aaPredicted RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 TXLNAP40222 546 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 UBASH3AP57075 661 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 PTH1RQ03431 593 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 LRMPQ12912 555 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 TRDNQ13061 729 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 TRIM14Q14142 442 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 SAFBQ15424 915 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD4-206ENST00000536999 ELF2Q15723 593 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 KRT24Q2M2I5 525 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 EAPPQ56P03 285 aaPredicted RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 CCDC102BQ68D86 513 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 Q6ZUG5 572 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 LINC00116Q8NCU8 138 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 EHBP1Q8NDI1 1231 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 ENGASEQ8NFI3 743 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 FBXO18Q8NFZ0 1043 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 PPM1EQ8WY54 764 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 PPP1R13BQ96KQ4 1090 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 CAPNS2Q96L46 248 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 GPR101Q96P66 508 aaPredicted RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 ARID3AQ99856 593 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 HAUS7Q99871 368 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 PHAXQ9H814 394 aaKnown RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 VIPAS39Q9H9C1 493 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 TFIP11Q9UBB9 837 aaKnown RBP6.67□□□□□ -1.34
CHD4-206ENST00000536999 AK9Q5TCS8 1911 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 TIAM2Q8IVF5 1701 aa6.67□□□□□ -1.34
CHD4-206ENST00000536999 FAM237AA0A1B0GTK4 181 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 TULP1O00294 542 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 AP5Z1O43299 807 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 URI1O94763 535 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 CLSTN1O94985 981 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 CCDC175P0C221 793 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 ERCC5P28715 1186 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 HOXC9P31274 260 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 NT5C2P49902 561 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 CLCN6P51797 869 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 SETQ01105 290 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 NMIQ13287 307 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 TOB2Q14106 344 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 SMC1AQ14683 1233 aaKnown RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 IMMTQ16891 758 aaKnown RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 WHAMMP3Q1A5X7 153 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 WASHC4Q2M389 1173 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 ADCK5Q3MIX3 580 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 ERFEQ4G0M1 354 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 TMC6Q7Z403 805 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 FERMT3Q86UX7 667 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 DHX40Q8IX18 779 aaKnown RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 FMR1NBQ8N0W7 255 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 C17orf53Q8N3J3 647 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 NECAB1Q8N987 351 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 KBTBD3Q8NAB2 608 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 SLC17A8Q8NDX2 589 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 IL17REQ8NFR9 667 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 IP6K1Q92551 441 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 IQCDQ96DY2 449 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 PGBD1Q96JS3 809 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 C8orf76Q96K31 380 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 PANX2Q96RD6 677 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 TMX1Q9H3N1 280 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 DEF6Q9H4E7 631 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 ZNHIT6Q9NWK9 470 aaKnown RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 ORC3Q9UBD5 711 aaPredicted RBP6.66□□□□□ -1.34
CHD4-206ENST00000536999 AKAP2Q9Y2D5 859 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 CHMP3Q9Y3E7 222 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 FHOD1Q9Y613 1164 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 C4AP0C0L4 1744 aa6.66□□□□□ -1.34
CHD4-206ENST00000536999 LOC102724428A0A0B4J2F2 783 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 CCDC196A0A1B0GTZ2 297 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 A0A1B0GUL7 405 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 CUTAO60888 179 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 DDNO94850 711 aaPredicted RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 ITGBL1O95965 494 aaPredicted RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 NBPF7P0C2Y1 421 aaPredicted RBP6.65□□□□□ -1.34
CHD4-206ENST00000536999 RFC4P35249 363 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 ACTN2P35609 894 aa6.65□□□□□ -1.34
CHD4-206ENST00000536999 SYKP43405 635 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms