RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 DDX11L8A8MPP1 907 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 POTECB2RU33 542 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 MYO1BO43795 1136 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 NBPF9Q3BBW0 867 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 IFNL3Q8IZI9 196 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 SDR42E1Q8WUS8 393 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 TBC1D2Q9BYX2 928 aa14.63□□□□□ -0.07
SCARB1-204ENST00000535005 EPB41L4AQ9HCS5 686 aaPredicted RBP14.63□□□□□ -0.07
SCARB1-204ENST00000535005 DCP1AQ9NPI6 582 aaPredicted RBP14.63□□□□□ -0.07
SCARB1-204ENST00000535005 FGAP02671 866 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 USP5P45974 858 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 RBM26Q5T8P6 1007 aaKnown RBP14.62□□□□□ -0.07
SCARB1-204ENST00000535005 USP50Q70EL3 339 aaPredicted RBP14.62□□□□□ -0.07
SCARB1-204ENST00000535005 TRPM4Q8TD43 1214 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 TGFBRAP1Q8WUH2 860 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 TMOD2Q9NZR1 351 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 CTNNA3Q9UI47 895 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 RRP9O43818 475 aaKnown RBP14.62□□□□□ -0.07
SCARB1-204ENST00000535005 ENTPD3O75355 529 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 APPP05067 770 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 HIRAP54198 1017 aaPredicted RBP14.62□□□□□ -0.07
SCARB1-204ENST00000535005 NECTIN1Q15223 517 aa14.62□□□□□ -0.07
SCARB1-204ENST00000535005 RBM8AQ9Y5S9 174 aaKnown RBP14.62□□□□□ -0.07
SCARB1-204ENST00000535005 SCN4AP35499 1836 aa14.61□□□□□ -0.07
SCARB1-204ENST00000535005 FLT1P17948 1338 aa14.61□□□□□ -0.07
SCARB1-204ENST00000535005 EPHX2P34913 555 aa14.61□□□□□ -0.07
SCARB1-204ENST00000535005 NFIAQ12857 509 aa14.61□□□□□ -0.07
SCARB1-204ENST00000535005 SBK1Q52WX2 424 aa14.61□□□□□ -0.07
SCARB1-204ENST00000535005 TAF1DQ9H5J8 278 aaPredicted RBP14.61□□□□□ -0.07
SCARB1-204ENST00000535005 DDX4Q9NQI0 724 aaKnown RBP14.61□□□□□ -0.07
SCARB1-204ENST00000535005 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
SCARB1-204ENST00000535005 XRCC6P12956 609 aaKnown RBP eCLIP14.6□□□□□ -0.07
SCARB1-204ENST00000535005 FAM83AQ86UY5 434 aa14.6□□□□□ -0.07
SCARB1-204ENST00000535005 MAPKAPK5Q8IW41 473 aa14.6□□□□□ -0.07
SCARB1-204ENST00000535005 ZC3H15Q8WU90 426 aaKnown RBP14.6□□□□□ -0.07
SCARB1-204ENST00000535005 KCNB2Q92953 911 aa14.6□□□□□ -0.07
SCARB1-204ENST00000535005 NAPBQ9H115 298 aa14.6□□□□□ -0.07
SCARB1-204ENST00000535005 SLKQ9H2G2 1235 aaPredicted RBP14.6□□□□□ -0.07
SCARB1-204ENST00000535005 PITPNM2Q9BZ72 1349 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 CLRN2A0PK11 232 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 HSPA4P34932 840 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 TDO2P48775 406 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 OSBPL5Q9H0X9 879 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-204ENST00000535005 PGAP2Q9UHJ9 254 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 COL2A1P02458 1487 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-204ENST00000535005 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 VEGFAP15692 232 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-204ENST00000535005 CACNB3P54284 484 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 CTR9Q6PD62 1173 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 PNMA8AQ86V59 439 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-204ENST00000535005 FAM151AQ8WW52 585 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 ARPP21Q9UBL0 812 aaPredicted RBP14.59□□□□□ -0.07
SCARB1-204ENST00000535005 ANAPC4Q9UJX5 808 aa14.59□□□□□ -0.07
SCARB1-204ENST00000535005 CDK5RAP2Q96SN8 1893 aa14.58□□□□□ -0.07
SCARB1-204ENST00000535005 ASTN2O75129 1339 aaPredicted RBP14.58□□□□□ -0.08
SCARB1-204ENST00000535005 USP17L12C9JPN9 530 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 USP17L21D6R901 530 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 TNFAIP1Q13829 316 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 C12orf60Q5U649 245 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 CREB3L3Q68CJ9 461 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 APOBEC3FQ8IUX4 373 aaKnown RBP14.58□□□□□ -0.08
SCARB1-204ENST00000535005 DHX36Q9H2U1 1008 aaKnown RBP14.58□□□□□ -0.08
SCARB1-204ENST00000535005 MCM9Q9NXL9 1143 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
SCARB1-204ENST00000535005 CNTNAP1P78357 1384 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 ATRNL1Q5VV63 1379 aa14.58□□□□□ -0.08
SCARB1-204ENST00000535005 SLC27A2O14975 620 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 MCCP23508 829 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 TNNI2P48788 182 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 RBM25P49756 843 aaKnown RBP14.57□□□□□ -0.08
SCARB1-204ENST00000535005 PICALMQ13492 652 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
SCARB1-204ENST00000535005 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 ANGEL2Q5VTE6 544 aaKnown RBP14.57□□□□□ -0.08
SCARB1-204ENST00000535005 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 IL17RAQ96F46 866 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 VEZTQ9HBM0 779 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 TAOK2Q9UL54 1235 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 DDX60LQ5H9U9 1706 aaKnown RBP14.57□□□□□ -0.08
SCARB1-204ENST00000535005 TCP10L2B9ZVM9 353 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 ZNF213O14771 459 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 CYP21A2P08686 494 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 ANAPC15P60006 121 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 TTC6Q86TZ1 520 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 ZFPM1Q8IX07 1006 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 AMOTL1Q8IY63 956 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 RRAGCQ9HB90 399 aa14.57□□□□□ -0.08
SCARB1-204ENST00000535005 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
SCARB1-204ENST00000535005 PPARAQ07869 468 aa14.56□□□□□ -0.08
SCARB1-204ENST00000535005 SH3BP5LQ7L8J4 393 aa14.56□□□□□ -0.08
SCARB1-204ENST00000535005 GGA3Q9NZ52 723 aa14.56□□□□□ -0.08
SCARB1-204ENST00000535005 SAP30BPQ9UHR5 308 aaKnown RBP14.56□□□□□ -0.08
SCARB1-204ENST00000535005 NAV1Q8NEY1 1877 aa14.56□□□□□ -0.08
SCARB1-204ENST00000535005 TRAK2O60296 914 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 HSP90AA1P07900 732 aaKnown RBP14.55□□□□□ -0.08
SCARB1-204ENST00000535005 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
SCARB1-204ENST00000535005 TCP10Q12799 353 aa14.55□□□□□ -0.08
SCARB1-204ENST00000535005 RASA3Q14644 834 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms