RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 PTPAQ15257 358 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 LRRC8AQ8IWT6 810 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 CACTINQ8WUQ7 758 aaKnown RBP21.73■■□□□ 1.07
COPS7A-204ENST00000534947 IMPACTQ9P2X3 320 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 NIP7Q9Y221 180 aaKnown RBP eCLIP21.73■■□□□ 1.07
COPS7A-204ENST00000534947 ZNF804BA4D1E1 1349 aa21.73■■□□□ 1.07
COPS7A-204ENST00000534947 RANBP6O60518 1105 aaKnown RBP21.72■■□□□ 1.07
COPS7A-204ENST00000534947 GSDMDP57764 484 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 TPM4P67936 248 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 LRMPQ12912 555 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 ELOA2Q8IYF1 753 aaPredicted RBP21.72■■□□□ 1.07
COPS7A-204ENST00000534947 MAP3K14Q99558 947 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 SENP2Q9HC62 589 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 CCDC196A0A1B0GTZ2 297 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 CHRNDQ07001 517 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 PPP2R5BQ15173 497 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 CCDC144BQ3MJ40 725 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 CCDC144CPQ8IYA2 1237 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 PHKBQ93100 1093 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 AIFM3Q96NN9 605 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 SLC4A4Q9Y6R1 1079 aa21.72■■□□□ 1.07
COPS7A-204ENST00000534947 SMTNL1A8MU46 457 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 CUTAO60888 179 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 TDO2P48775 406 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 CTDSPL2Q05D32 466 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 ITPK1Q13572 414 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.71■■□□□ 1.07
COPS7A-204ENST00000534947 TUBE1Q9UJT0 475 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 ANAPC4Q9UJX5 808 aa21.71■■□□□ 1.07
COPS7A-204ENST00000534947 ERICH2A1L162 156 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 IKBKBO14920 756 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 WDHD1O75717 1129 aaPredicted RBP21.7■■□□□ 1.06
COPS7A-204ENST00000534947 BCAMP50895 628 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 BARGINQ6ZT62 677 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 TRIM22Q8IYM9 498 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 LCORLQ8N3X6 602 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 MARCH10Q8NA82 808 aaPredicted RBP21.7■■□□□ 1.06
COPS7A-204ENST00000534947 KCND1Q9NSA2 647 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 GNL3LQ9NVN8 582 aaKnown RBP21.7■■□□□ 1.06
COPS7A-204ENST00000534947 MROH7-TTC4A0A0A0MT08 1334 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 RXRAP19793 462 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 SYKP43405 635 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 RBM10P98175 930 aaKnown RBP21.7■■□□□ 1.06
COPS7A-204ENST00000534947 DPCR1Q3MIW9 517 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 RESP18Q5W5W9 173 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 OSBPL5Q9H0X9 879 aaPredicted RBP21.7■■□□□ 1.06
COPS7A-204ENST00000534947 LRP2BPQ9P2M1 347 aa21.7■■□□□ 1.06
COPS7A-204ENST00000534947 WTAPQ15007 396 aa21.69■■□□□ 1.06
COPS7A-204ENST00000534947 SAFBQ15424 915 aaKnown RBP eCLIP21.69■■□□□ 1.06
COPS7A-204ENST00000534947 SPATA31A5Q5VU36 1347 aa21.69■■□□□ 1.06
COPS7A-204ENST00000534947 SPATA31A7Q8IWB4 1347 aa21.69■■□□□ 1.06
COPS7A-204ENST00000534947 UBE4AQ14139 1066 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
COPS7A-204ENST00000534947 RTN1Q16799 776 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 NOSTRINQ8IVI9 506 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 SLC26A6Q9BXS9 759 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 TACC3Q9Y6A5 838 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 SNAP23O00161 211 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 MYO1BO43795 1136 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 MMP1P03956 469 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 UBE2Q2Q8WVN8 375 aa21.68■■□□□ 1.06
COPS7A-204ENST00000534947 NOL10Q9BSC4 688 aaKnown RBP21.68■■□□□ 1.06
COPS7A-204ENST00000534947 FOXP1Q9H334 677 aaPredicted RBP21.68■■□□□ 1.06
COPS7A-204ENST00000534947 DEXIO95424 95 aa21.67■■□□□ 1.06
COPS7A-204ENST00000534947 SHC4Q6S5L8 630 aa21.67■■□□□ 1.06
COPS7A-204ENST00000534947 PAXBP1Q9Y5B6 917 aa21.67■■□□□ 1.06
COPS7A-204ENST00000534947 PRKAB2O43741 272 aa21.67■■□□□ 1.06
COPS7A-204ENST00000534947 PCP11498 1178 aaKnown RBP21.67■■□□□ 1.06
COPS7A-204ENST00000534947 MARCKSP29966 332 aaPredicted RBP21.67■■□□□ 1.06
COPS7A-204ENST00000534947 MORC2Q9Y6X9 1032 aaPredicted RBP21.67■■□□□ 1.06
COPS7A-204ENST00000534947 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
COPS7A-204ENST00000534947 FAM177BA6PVY3 158 aa21.66■■□□□ 1.06
COPS7A-204ENST00000534947 PPARAQ07869 468 aa21.66■■□□□ 1.06
COPS7A-204ENST00000534947 BSDC1Q9NW68 430 aaPredicted RBP21.66■■□□□ 1.06
COPS7A-204ENST00000534947 SCN7AQ01118 1682 aa21.66■■□□□ 1.06
COPS7A-204ENST00000534947 CACNA1SQ13698 1873 aa21.66■■□□□ 1.06
COPS7A-204ENST00000534947 CTIFO43310 598 aaKnown RBP21.65■■□□□ 1.06
COPS7A-204ENST00000534947 CYP7A1P22680 504 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 RILPL1Q5EBL4 403 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 NBPF11Q86T75 865 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 ANKRD18AQ8IVF6 992 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 ERCC4Q92889 916 aaPredicted RBP21.65■■□□□ 1.06
COPS7A-204ENST00000534947 ACSBG1Q96GR2 724 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 MYL10Q9BUA6 226 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 INCENPQ9NQS7 918 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 SYCP1Q15431 976 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 TMED8Q6PL24 325 aaPredicted RBP21.65■■□□□ 1.06
COPS7A-204ENST00000534947 CRACR2BQ8N4Y2 399 aaPredicted RBP21.65■■□□□ 1.06
COPS7A-204ENST00000534947 KRI1Q8N9T8 703 aaKnown RBP21.65■■□□□ 1.06
COPS7A-204ENST00000534947 ESR2Q92731 530 aa21.65■■□□□ 1.06
COPS7A-204ENST00000534947 PDS5AQ29RF7 1337 aaKnown RBP21.64■■□□□ 1.06
COPS7A-204ENST00000534947 A0A087WWV3 80 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 MAGEB6P1A0A0J9YX57 407 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 RIOK3O14730 519 aaKnown RBP21.64■■□□□ 1.05
COPS7A-204ENST00000534947 SEMA3EO15041 775 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 KCNJ6P48051 423 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 NCAPHQ15003 741 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 CCDC150Q8NCX0 1101 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 UBAC1Q9BSL1 405 aa21.64■■□□□ 1.05
COPS7A-204ENST00000534947 HOOK1Q9UJC3 728 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms