RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 HDAC5Q9UQL6 1122 aa26.5■■□□□ 1.83
SSH3-211ENST00000534112 A0A0G2JLL6 359 aaPredicted RBP26.49■■□□□ 1.83
SSH3-211ENST00000534112 GJB1P08034 283 aa26.49■■□□□ 1.83
SSH3-211ENST00000534112 CCL5P13501 91 aa26.49■■□□□ 1.83
SSH3-211ENST00000534112 MAP3K10Q02779 954 aa26.49■■□□□ 1.83
SSH3-211ENST00000534112 PRKCZQ05513 592 aa26.49■■□□□ 1.83
SSH3-211ENST00000534112 PRRT2Q7Z6L0 340 aaPredicted RBP26.49■■□□□ 1.83
SSH3-211ENST00000534112 ZSCAN29Q8IWY8 852 aaPredicted RBP26.49■■□□□ 1.83
SSH3-211ENST00000534112 BIN2Q9UBW5 565 aaPredicted RBP26.49■■□□□ 1.83
SSH3-211ENST00000534112 AFG3L2Q9Y4W6 797 aa26.49■■□□□ 1.83
SSH3-211ENST00000534112 GJA8P48165 433 aa26.48■■□□□ 1.83
SSH3-211ENST00000534112 TIMM10P62072 90 aa26.48■■□□□ 1.83
SSH3-211ENST00000534112 DZIP1Q86YF9 867 aaKnown RBP26.48■■□□□ 1.83
SSH3-211ENST00000534112 TRMT2AQ8IZ69 625 aaKnown RBP26.48■■□□□ 1.83
SSH3-211ENST00000534112 DPF3Q92784 378 aa26.48■■□□□ 1.83
SSH3-211ENST00000534112 FAM163AQ96GL9 167 aaPredicted RBP26.48■■□□□ 1.83
SSH3-211ENST00000534112 RNF208Q9H0X6 261 aa26.48■■□□□ 1.83
SSH3-211ENST00000534112 ABCF2Q9UG63 623 aa26.48■■□□□ 1.83
SSH3-211ENST00000534112 TRIOBPQ9H2D6 2365 aa26.48■■□□□ 1.83
SSH3-211ENST00000534112 RASGRF1Q13972 1273 aa26.47■■□□□ 1.83
SSH3-211ENST00000534112 AK9Q5TCS8 1911 aa26.47■■□□□ 1.83
SSH3-211ENST00000534112 DDTLA6NHG4 134 aaPredicted RBP26.46■■□□□ 1.83
SSH3-211ENST00000534112 SLURP2P0DP57 97 aa26.46■■□□□ 1.83
SSH3-211ENST00000534112 UBXN2AP68543 259 aa26.46■■□□□ 1.83
SSH3-211ENST00000534112 UBE2Q1Q7Z7E8 422 aa26.46■■□□□ 1.83
SSH3-211ENST00000534112 SLF2Q8IX21 1173 aa26.46■■□□□ 1.83
SSH3-211ENST00000534112 API5Q9BZZ5 524 aaKnown RBP26.46■■□□□ 1.83
SSH3-211ENST00000534112 GABRQQ9UN88 632 aa26.46■■□□□ 1.83
SSH3-211ENST00000534112 RFX7Q2KHR2 1363 aa26.46■■□□□ 1.83
SSH3-211ENST00000534112 MYH13Q9UKX3 1938 aa26.45■■□□□ 1.83
SSH3-211ENST00000534112 CTNND1O60716 968 aaKnown RBP26.45■■□□□ 1.82
SSH3-211ENST00000534112 GADL1Q6ZQY3 521 aa26.45■■□□□ 1.82
SSH3-211ENST00000534112 SLAIN1Q8ND83 568 aa26.45■■□□□ 1.82
SSH3-211ENST00000534112 MEIS3Q99687 375 aa26.45■■□□□ 1.82
SSH3-211ENST00000534112 DDX4Q9NQI0 724 aaKnown RBP26.45■■□□□ 1.82
SSH3-211ENST00000534112 SLC45A1Q9Y2W3 748 aa26.45■■□□□ 1.82
SSH3-211ENST00000534112 PDS5AQ29RF7 1337 aaKnown RBP26.44■■□□□ 1.82
SSH3-211ENST00000534112 RANBP2P49792 3224 aaKnown RBP26.44■■□□□ 1.82
SSH3-211ENST00000534112 CT47B1P0C2W7 299 aaPredicted RBP26.44■■□□□ 1.82
SSH3-211ENST00000534112 BTDP43251 543 aa26.44■■□□□ 1.82
SSH3-211ENST00000534112 SPTY2D1Q68D10 685 aaPredicted RBP26.44■■□□□ 1.82
SSH3-211ENST00000534112 PICALMQ13492 652 aa26.43■■□□□ 1.82
SSH3-211ENST00000534112 CHRDL2Q6WN34 429 aa26.43■■□□□ 1.82
SSH3-211ENST00000534112 XAGE2Q96GT9 111 aa26.42■■□□□ 1.82
SSH3-211ENST00000534112 UNC93B1Q9H1C4 597 aa26.42■■□□□ 1.82
SSH3-211ENST00000534112 SZT2Q5T011 3432 aa26.42■■□□□ 1.82
SSH3-211ENST00000534112 A0A1B0GUL7 405 aa26.41■■□□□ 1.82
SSH3-211ENST00000534112 TRIM75PA6NK02 468 aa26.41■■□□□ 1.82
SSH3-211ENST00000534112 ADCY3O60266 1144 aa26.41■■□□□ 1.82
SSH3-211ENST00000534112 FLT3LGP49771 235 aa26.41■■□□□ 1.82
SSH3-211ENST00000534112 U2AF1L4Q8WU68 220 aaKnown RBP26.41■■□□□ 1.82
SSH3-211ENST00000534112 HTATIP2Q9BUP3 242 aa26.41■■□□□ 1.82
SSH3-211ENST00000534112 AKAP2Q9Y2D5 859 aa26.41■■□□□ 1.82
SSH3-211ENST00000534112 MROH7-TTC4A0A0A0MT08 1334 aa26.4■■□□□ 1.82
SSH3-211ENST00000534112 GPR75-ASB3A0A0A6YYF3 556 aa26.4■■□□□ 1.82
SSH3-211ENST00000534112 RHBDL3P58872 404 aa26.4■■□□□ 1.82
SSH3-211ENST00000534112 MECOMQ03112 1051 aa26.4■■□□□ 1.82
SSH3-211ENST00000534112 TFCP2Q12800 502 aa26.4■■□□□ 1.82
SSH3-211ENST00000534112 MVPQ14764 893 aaKnown RBP26.4■■□□□ 1.82
SSH3-211ENST00000534112 ERICH6Q7L0X2 663 aa26.4■■□□□ 1.82
SSH3-211ENST00000534112 SMCR8Q8TEV9 937 aaPredicted RBP26.4■■□□□ 1.82
SSH3-211ENST00000534112 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.4■■□□□ 1.82
SSH3-211ENST00000534112 SRGAP3O43295 1099 aa26.39■■□□□ 1.82
SSH3-211ENST00000534112 CCDC84Q86UT8 332 aaPredicted RBP26.39■■□□□ 1.82
SSH3-211ENST00000534112 ZNF384Q8TF68 577 aa26.39■■□□□ 1.82
SSH3-211ENST00000534112 RBM27Q9P2N5 1060 aaKnown RBP26.39■■□□□ 1.82
SSH3-211ENST00000534112 TNPO2O14787 897 aaKnown RBP26.38■■□□□ 1.81
SSH3-211ENST00000534112 TBC1D12O60347 775 aa26.38■■□□□ 1.81
SSH3-211ENST00000534112 NPM3O75607 178 aaKnown RBP26.38■■□□□ 1.81
SSH3-211ENST00000534112 SGPL1O95470 568 aa26.38■■□□□ 1.81
SSH3-211ENST00000534112 ELNP15502 786 aa26.38■■□□□ 1.81
SSH3-211ENST00000534112 PXYLP1Q8TE99 480 aa26.38■■□□□ 1.81
SSH3-211ENST00000534112 AGTPBP1Q9UPW5 1226 aa26.38■■□□□ 1.81
SSH3-211ENST00000534112 MYH2Q9UKX2 1941 aa26.37■■□□□ 1.81
SSH3-211ENST00000534112 FARP2O94887 1054 aaPredicted RBP26.37■■□□□ 1.81
SSH3-211ENST00000534112 IRF5Q13568 498 aa26.37■■□□□ 1.81
SSH3-211ENST00000534112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.37■■□□□ 1.81
SSH3-211ENST00000534112 INHAP05111 366 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 GNAI3P08754 354 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 MTX1Q13505 466 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 ANKRD13CQ8N6S4 541 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 NEUROD6Q96NK8 337 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.36■■□□□ 1.81
SSH3-211ENST00000534112 HMG20BQ9P0W2 317 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 NR2E3Q9Y5X4 410 aa26.36■■□□□ 1.81
SSH3-211ENST00000534112 RARSP54136 660 aaKnown RBP26.35■■□□□ 1.81
SSH3-211ENST00000534112 TREML2Q5T2D2 321 aa26.35■■□□□ 1.81
SSH3-211ENST00000534112 ARHGAP45Q92619 1136 aa26.35■■□□□ 1.81
SSH3-211ENST00000534112 FAM196BA6NMK8 535 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 LDHCP07864 332 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 GSTO1P78417 241 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 PI16Q6UXB8 463 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 TBC1D9Q6ZT07 1266 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 SPATA5Q8NB90 893 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 NSUN4Q96CB9 384 aaKnown RBP26.34■■□□□ 1.81
SSH3-211ENST00000534112 DOCK2Q92608 1830 aa26.34■■□□□ 1.81
SSH3-211ENST00000534112 MAP4K4O95819 1239 aaPredicted RBP26.33■■□□□ 1.81
SSH3-211ENST00000534112 TFRCP02786 760 aaKnown RBP26.33■■□□□ 1.81
SSH3-211ENST00000534112 SPP2Q13103 211 aa26.33■■□□□ 1.81
SSH3-211ENST00000534112 PROCA1Q8NCQ7 364 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms