RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 CAPN2P17655 700 aa10.11□□□□□ -0.79
NEDD8-207ENST00000533242 UBXN2AP68543 259 aa10.11□□□□□ -0.79
NEDD8-207ENST00000533242 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
NEDD8-207ENST00000533242 KAZALD1Q96I82 304 aa10.11□□□□□ -0.79
NEDD8-207ENST00000533242 UTYO14607 1347 aa10.11□□□□□ -0.79
NEDD8-207ENST00000533242 KIF16BQ96L93 1317 aa10.11□□□□□ -0.79
NEDD8-207ENST00000533242 INPP5BP32019 993 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 METTL24Q5JXM2 366 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 NOL9Q5SY16 702 aaKnown RBP10.1□□□□□ -0.79
NEDD8-207ENST00000533242 FAM151AQ8WW52 585 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 NR2E3Q9Y5X4 410 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 ZBTB7BO15156 539 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-207ENST00000533242 FCGRTP55899 365 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 MOGSQ13724 837 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 ALDH1L2Q3SY69 923 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 RABL6Q3YEC7 729 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-207ENST00000533242 SMC5Q8IY18 1101 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
NEDD8-207ENST00000533242 VGLL2Q8N8G2 317 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
NEDD8-207ENST00000533242 PTPRFP10586 1907 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 HTTP42858 3142 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 A0A1W2PPC1 479 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 PDE8BO95263 885 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 LRRC24Q50LG9 513 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 MIGA2Q7L4E1 593 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 SLAIN1Q8ND83 568 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 PARK7Q99497 189 aaKnown RBP10.09□□□□□ -0.79
NEDD8-207ENST00000533242 RNF208Q9H0X6 261 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 ALPK3Q96L96 1907 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 DOCK1Q14185 1865 aa10.09□□□□□ -0.79
NEDD8-207ENST00000533242 ECM2O94769 699 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-207ENST00000533242 FARP2O94887 1054 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-207ENST00000533242 BCRP11274 1271 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 BCAMP50895 628 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 SLC4A10Q6U841 1118 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 TBC1D32Q96NH3 1257 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 BIN2Q9UBW5 565 aaPredicted RBP10.08□□□□□ -0.8
NEDD8-207ENST00000533242 PHIPQ8WWQ0 1821 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 CXCL11O14625 94 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 IFIT1P09914 478 aaKnown RBP10.08□□□□□ -0.8
NEDD8-207ENST00000533242 ANKRD44Q8N8A2 993 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 WDR66Q8TBY9 1149 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 TRIOBPQ9H2D6 2365 aa10.08□□□□□ -0.8
NEDD8-207ENST00000533242 NBPF7P0C2Y1 421 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-207ENST00000533242 FGFR2P21802 821 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 PRKCZQ05513 592 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 GPAT2Q6NUI2 795 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 U2AF1L4Q8WU68 220 aaKnown RBP10.07□□□□□ -0.8
NEDD8-207ENST00000533242 BICC1Q9H694 974 aaKnown RBP10.07□□□□□ -0.8
NEDD8-207ENST00000533242 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-207ENST00000533242 MYH2Q9UKX2 1941 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 IPO8O15397 1037 aaKnown RBP10.07□□□□□ -0.8
NEDD8-207ENST00000533242 SGPL1O95470 568 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 PUM3Q15397 648 aaKnown RBP10.07□□□□□ -0.8
NEDD8-207ENST00000533242 SIRT2Q8IXJ6 389 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 LNPKQ9C0E8 428 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 UNC93B1Q9H1C4 597 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 DAGLAQ9Y4D2 1042 aa10.07□□□□□ -0.8
NEDD8-207ENST00000533242 CDC42EP5Q6NZY7 148 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 GABRQQ9UN88 632 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 SLC45A1Q9Y2W3 748 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 ADCY3O60266 1144 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 SLC5A1P13866 664 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 TCP10Q12799 353 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 FASTKD5Q7L8L6 764 aaKnown RBP10.06□□□□□ -0.8
NEDD8-207ENST00000533242 SLC17A8Q8NDX2 589 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
NEDD8-207ENST00000533242 A0A0G2JLL6 359 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-207ENST00000533242 DLL1O00548 723 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 IRF5Q13568 498 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 PRRT2Q7Z6L0 340 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-207ENST00000533242 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-207ENST00000533242 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 CEP290O15078 2479 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 EVI5O60447 810 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 CYP2C8P10632 490 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 NUCB1Q02818 461 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 SCYL3Q8IZE3 742 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 LPIN2Q92539 896 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 USP40Q9NVE5 1235 aa10.05□□□□□ -0.8
NEDD8-207ENST00000533242 ATRNL1Q5VV63 1379 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 INHAP05111 366 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
NEDD8-207ENST00000533242 NFIAQ12857 509 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 PICK1Q9NRD5 415 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 LOC285556D6RIA3 1793 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 ATAD5Q96QE3 1844 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 SALL1Q9NSC2 1324 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 PHF20L1A8MW92 1017 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 EYA2O00167 538 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 ENTPD3O75355 529 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 TFRCP02786 760 aaKnown RBP10.04□□□□□ -0.8
NEDD8-207ENST00000533242 FLT3LGP49771 235 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 KLHDC4Q8TBB5 520 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 ANTXR1Q9H6X2 564 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 AFG3L2Q9Y4W6 797 aa10.04□□□□□ -0.8
NEDD8-207ENST00000533242 DOCK3Q8IZD9 2030 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms