RNA–Protein interactions for RNA: ENST00000532069.5

CLNS1A-211, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 898 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-211ENST00000532069 CHAF1AQ13111 956 aaPredicted RBP16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 TRMT44Q8IYL2 757 aaKnown RBP16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 LINS1Q8NG48 757 aa16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 SEMA6BQ9H3T3 888 aa16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 ZHX2Q9Y6X8 837 aa16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 PTPRFP10586 1907 aa16.48■□□□□ 0.23
CLNS1A-211ENST00000532069 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLNS1A-211ENST00000532069 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
CLNS1A-211ENST00000532069 SCYL3Q8IZE3 742 aa16.47■□□□□ 0.23
CLNS1A-211ENST00000532069 TMEM265A0A087WTH1 108 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 COL6A1P12109 1028 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 RALBP1Q15311 655 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 C8orf58Q8NAV2 365 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 DOCK2Q92608 1830 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 TTC28Q96AY4 2481 aa16.46■□□□□ 0.23
CLNS1A-211ENST00000532069 MYLIPQ8WY64 445 aa16.45■□□□□ 0.22
CLNS1A-211ENST00000532069 AFG3L2Q9Y4W6 797 aa16.45■□□□□ 0.22
CLNS1A-211ENST00000532069 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 MAST2Q6P0Q8 1798 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 PTPRAP18433 802 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 SMAD3P84022 425 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 FOXO4P98177 505 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 TCP10Q12799 353 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 LRRC26Q2I0M4 334 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 DNAAF4Q8WXU2 420 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 DOCK1Q14185 1865 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 MROH5Q6ZUA9 1318 aa16.44■□□□□ 0.22
CLNS1A-211ENST00000532069 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 LMBR1LQ6UX01 489 aa16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 FBXO33Q7Z6M2 555 aa16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 SOCS4Q8WXH5 440 aa16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 PRUNE2Q8WUY3 3088 aa16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 MYH13Q9UKX3 1938 aa16.43■□□□□ 0.22
CLNS1A-211ENST00000532069 MUC3AQ02505 3323 aa16.42■□□□□ 0.22
CLNS1A-211ENST00000532069 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-211ENST00000532069 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-211ENST00000532069 GRIK5Q16478 980 aa16.42■□□□□ 0.22
CLNS1A-211ENST00000532069 MAP3K21Q5TCX8 1036 aa16.42■□□□□ 0.22
CLNS1A-211ENST00000532069 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
CLNS1A-211ENST00000532069 SLC4A2P04920 1241 aa16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 TRIB2Q92519 343 aa16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 NUDT12Q9BQG2 462 aa16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 SPINK5Q9NQ38 1064 aaPredicted RBP16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 IQSEC3Q9UPP2 1182 aaPredicted RBP16.41■□□□□ 0.22
CLNS1A-211ENST00000532069 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 FLIIQ13045 1269 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 TRIM32Q13049 653 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 LTBP2Q14767 1821 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 PHIPQ8WWQ0 1821 aa16.4■□□□□ 0.22
CLNS1A-211ENST00000532069 CYP2B6P20813 491 aa16.39■□□□□ 0.21
CLNS1A-211ENST00000532069 MAP3K12Q12852 859 aa16.39■□□□□ 0.21
CLNS1A-211ENST00000532069 IL27Q8NEV9 243 aa16.39■□□□□ 0.21
CLNS1A-211ENST00000532069 RAPGEFL1Q9UHV5 662 aa16.39■□□□□ 0.21
CLNS1A-211ENST00000532069 ARIH1Q9Y4X5 557 aaPredicted RBP16.39■□□□□ 0.21
CLNS1A-211ENST00000532069 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 FRMPD3Q5JV73 1810 aa16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 PHF20L1A8MW92 1017 aa16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 CDC42EP5Q6NZY7 148 aa16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 CCAR1Q8IX12 1150 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 ATXN2LQ8WWM7 1075 aaKnown RBP16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 SENP6Q9GZR1 1112 aaPredicted RBP16.38■□□□□ 0.21
CLNS1A-211ENST00000532069 MSCO60682 206 aa16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 G2E3Q7L622 706 aa16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 TSPYL6Q8N831 410 aa16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 C1QTNF1Q9BXJ1 281 aa16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 TTYH1Q9H313 450 aaPredicted RBP16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 DAGLAQ9Y4D2 1042 aa16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
CLNS1A-211ENST00000532069 ENTPD3O75355 529 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 CACNB2Q08289 660 aaPredicted RBP16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 NFIAQ12857 509 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 SHHQ15465 462 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 TWISTNBQ3B726 338 aaPredicted RBP16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 USP40Q9NVE5 1235 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 HCN4Q9Y3Q4 1203 aa16.36■□□□□ 0.21
CLNS1A-211ENST00000532069 CDH23Q9H251 3354 aa16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 IFIT1P09914 478 aaKnown RBP16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 MAPK4P31152 587 aa16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 RGS2P41220 211 aa16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 TREML2Q5T2D2 321 aa16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 LHX8Q68G74 356 aa16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 C9orf78Q9NZ63 289 aaPredicted RBP16.35■□□□□ 0.21
CLNS1A-211ENST00000532069 ADAMTS8Q9UP79 889 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms