RNA–Protein interactions for RNA: ENST00000531206.5

CDC27-207, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-207ENST00000531206 PLCB3Q01970 1234 aa4□□□□□ -1.77
CDC27-207ENST00000531206 FMR1Q06787 632 aaKnown RBP eCLIP4□□□□□ -1.77
CDC27-207ENST00000531206 NFX1Q12986 1120 aaKnown RBP4□□□□□ -1.77
CDC27-207ENST00000531206 MTERF2Q49AM1 385 aa4□□□□□ -1.77
CDC27-207ENST00000531206 PDZRN4Q6ZMN7 1036 aaPredicted RBP4□□□□□ -1.77
CDC27-207ENST00000531206 ZBTB33Q86T24 672 aa4□□□□□ -1.77
CDC27-207ENST00000531206 LRRC4BQ9NT99 713 aa4□□□□□ -1.77
CDC27-207ENST00000531206 MAPK8IP1Q9UQF2 711 aa4□□□□□ -1.77
CDC27-207ENST00000531206 NOD1Q9Y239 953 aa4□□□□□ -1.77
CDC27-207ENST00000531206 SRCAPQ6ZRS2 3230 aa4□□□□□ -1.77
CDC27-207ENST00000531206 KPNA6O60684 536 aa4□□□□□ -1.77
CDC27-207ENST00000531206 GRIA2P42262 883 aa4□□□□□ -1.77
CDC27-207ENST00000531206 NFKB2Q00653 900 aa4□□□□□ -1.77
CDC27-207ENST00000531206 GNL2Q13823 731 aaKnown RBP4□□□□□ -1.77
CDC27-207ENST00000531206 DSC3Q14574 896 aa4□□□□□ -1.77
CDC27-207ENST00000531206 KRT25Q7Z3Z0 450 aa4□□□□□ -1.77
CDC27-207ENST00000531206 PHTF2Q8N3S3 785 aa4□□□□□ -1.77
CDC27-207ENST00000531206 DCBLD2Q96PD2 775 aa4□□□□□ -1.77
CDC27-207ENST00000531206 PLEKHG2Q9H7P9 1386 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 APAF1O14727 1248 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 PAGE1O75459 146 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 SERPINB3P29508 390 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 GNA15P30679 374 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 IARSP41252 1262 aaKnown RBP3.99□□□□□ -1.77
CDC27-207ENST00000531206 ARMCX6Q7L4S7 300 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 CKAP2LQ8IYA6 745 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 GOLM1Q8NBJ4 401 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 CRELD1Q96HD1 420 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 EAF1Q96JC9 268 aaPredicted RBP3.99□□□□□ -1.77
CDC27-207ENST00000531206 UNKQ9C0B0 810 aaKnown RBP3.99□□□□□ -1.77
CDC27-207ENST00000531206 CNTN3Q9P232 1028 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 RBM19Q9Y4C8 960 aaKnown RBP3.99□□□□□ -1.77
CDC27-207ENST00000531206 E9PCH4 1651 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 ABCC6O95255 1503 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 ARHGEF10O15013 1369 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 PLCG2P16885 1265 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 GUCY2FP51841 1108 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 Q3C1V9 767 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 ABHD8Q96I13 439 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 CNNM2Q9H8M5 875 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 CDC23Q9UJX2 597 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 AKAP2Q9Y2D5 859 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 SLC4A7Q9Y6M7 1214 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 SLIT3O75094 1523 aa3.99□□□□□ -1.77
CDC27-207ENST00000531206 A6NCN8 305 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 CDC27P30260 824 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 WEE1P30291 646 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 GPSM2P81274 684 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 CCDC85BQ15834 202 aaPredicted RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 DUSP27Q5VZP5 1158 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 SHQ1Q6PI26 577 aaKnown RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 MAMSTRQ6ZN01 415 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 KRBA2Q6ZNG9 492 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 C3orf67Q6ZVT6 689 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 ZNF280CQ8ND82 737 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 KIFC2Q96AC6 838 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 OCEL1Q9H607 264 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 ZNF358Q9NW07 568 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 ADAMTSL1Q8N6G6 1762 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 KIF1BO60333 1816 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 BLACEA4D250 179 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 ZPR1O75312 459 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 MCL1Q07820 350 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 IDI1Q13907 227 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 SIM2Q14190 667 aaPredicted RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 SWI5Q1ZZU3 235 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 CATIPQ7Z7H3 387 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 DZIP3Q86Y13 1208 aaKnown RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 DPF3Q92784 378 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 SLC26A8Q96RN1 970 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 TMEM121BQ9BXQ6 578 aaPredicted RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 PTCH2Q9Y6C5 1203 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 SPATA31A1Q5TZJ5 1347 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 SBF1O95248 1867 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 CYP2E1P05181 493 aaPredicted RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 FAM163BP0C2L3 166 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 ZAP70P43403 619 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 RBL2Q08999 1139 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 APOBRQ0VD83 1088 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 DIXDC1Q155Q3 683 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 SMAD1Q15797 465 aaKnown RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 GPATCH4Q5T3I0 446 aaKnown RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 TTC13Q8NBP0 860 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 AIDAQ96BJ3 306 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 ARHGAP9Q9BRR9 750 aa3.98□□□□□ -1.77
CDC27-207ENST00000531206 FBXO9Q9UK97 447 aaPredicted RBP3.98□□□□□ -1.77
CDC27-207ENST00000531206 TSPAN6O43657 245 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 YBX3P16989 372 aaKnown RBP eCLIP3.97□□□□□ -1.77
CDC27-207ENST00000531206 HSD3B2P26439 372 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 POLR2BP30876 1174 aaKnown RBP3.97□□□□□ -1.77
CDC27-207ENST00000531206 TRIP4Q15650 581 aaPredicted RBP3.97□□□□□ -1.77
CDC27-207ENST00000531206 ERFEQ4G0M1 354 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 RASIP1Q5U651 963 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 C16orf46Q6P387 395 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 POTEEQ6S8J3 1075 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 SCUBE3Q8IX30 993 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 SMC5Q8IY18 1101 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 MYO1HQ8N1T3 1032 aa3.97□□□□□ -1.77
CDC27-207ENST00000531206 C1orf131Q8NDD1 294 aaKnown RBP3.97□□□□□ -1.77
CDC27-207ENST00000531206 FBF1Q8TES7 1133 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms